Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_B08
         (900 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p...    29   6.0  
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.        29   6.0  
L23646-9|AAM48529.1|  379|Caenorhabditis elegans Hypothetical pr...    28   7.9  
L23646-8|AAM48530.1|  411|Caenorhabditis elegans Hypothetical pr...    28   7.9  
L23646-7|AAA28038.3|  471|Caenorhabditis elegans Hypothetical pr...    28   7.9  
L23646-6|AAU87821.1|  469|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
           protein F43G9.6 protein.
          Length = 2034

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +2

Query: 542 WHVSDWKHSAEDVSKVEYQFQNLFNGNRDLAKTIHDFANSNWRE-IFQEVAPPMVKAIVS 718
           W+V      A+DVS    + + +F+GN  + +T+   A   WR+ I   +    ++ + +
Sbjct: 99  WNVLVRIIEAKDVSTGSARVRTIFDGNSKMTRTV-THAIPKWRQNILYTIKNQPLEKLAA 157

Query: 719 KIIHETFKLVR 751
           K++  T +LVR
Sbjct: 158 KVL--TLRLVR 166


>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
          Length = 2034

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +2

Query: 542 WHVSDWKHSAEDVSKVEYQFQNLFNGNRDLAKTIHDFANSNWRE-IFQEVAPPMVKAIVS 718
           W+V      A+DVS    + + +F+GN  + +T+   A   WR+ I   +    ++ + +
Sbjct: 99  WNVLVRIIEAKDVSTGSARVRTIFDGNSKMTRTV-THAIPKWRQNILYTIKNQPLEKLAA 157

Query: 719 KIIHETFKLVR 751
           K++  T +LVR
Sbjct: 158 KVL--TLRLVR 166


>L23646-9|AAM48529.1|  379|Caenorhabditis elegans Hypothetical
           protein F44E2.7b protein.
          Length = 379

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 659 SNWREIFQEVAPPMVKAIVSKIIHETFK 742
           S WREI  +   P V A+V KI+ E+ K
Sbjct: 143 SRWREIESDSDKPEVTALVKKILEESKK 170


>L23646-8|AAM48530.1|  411|Caenorhabditis elegans Hypothetical
           protein F44E2.7c protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 659 SNWREIFQEVAPPMVKAIVSKIIHETFK 742
           S WREI  +   P V A+V KI+ E+ K
Sbjct: 175 SRWREIESDSDKPEVTALVKKILEESKK 202


>L23646-7|AAA28038.3|  471|Caenorhabditis elegans Hypothetical
           protein F44E2.7a protein.
          Length = 471

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 659 SNWREIFQEVAPPMVKAIVSKIIHETFK 742
           S WREI  +   P V A+V KI+ E+ K
Sbjct: 235 SRWREIESDSDKPEVTALVKKILEESKK 262


>L23646-6|AAU87821.1|  469|Caenorhabditis elegans Hypothetical
           protein F44E2.7d protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 659 SNWREIFQEVAPPMVKAIVSKIIHETFK 742
           S WREI  +   P V A+V KI+ E+ K
Sbjct: 233 SRWREIESDSDKPEVTALVKKILEESKK 260


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,503,753
Number of Sequences: 27780
Number of extensions: 383732
Number of successful extensions: 1141
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)