Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_B03
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0078 + 17725931-17726057,17726128-17726305,17726942-177270... 59 5e-09
01_01_1151 + 9165454-9165580,9165658-9165835,9167256-9167337,916... 59 5e-09
05_06_0257 + 26723858-26724049,26724073-26724230,26724886-267250... 52 5e-07
04_04_1418 + 33428527-33428895,33429206-33429280,33429697-334299... 46 3e-05
01_06_0147 + 26997641-26997688,26997783-26997857,26997966-269980... 40 0.004
01_05_0018 - 17208358-17208367,17208485-17208537,17209321-172093... 36 0.058
04_03_0108 - 11340504-11340680,11341580-11341665,11341784-113418... 31 1.6
09_06_0187 + 21433842-21433887,21434504-21435246,21435437-214354... 30 2.2
05_04_0263 + 19534563-19535522 29 3.8
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 29 6.7
03_06_0617 - 35124114-35124148,35124243-35124335,35124415-351249... 29 6.7
02_05_0710 - 31115116-31115214,31115747-31115851,31116210-311162... 28 8.8
01_03_0156 + 13279354-13279479,13279722-13279790,13280102-132802... 28 8.8
01_01_1106 + 8750597-8754031 28 8.8
>05_04_0078 +
17725931-17726057,17726128-17726305,17726942-17727023,
17728500-17728676,17728763-17728930,17729028-17729219
Length = 307
Score = 58.8 bits (136), Expect = 5e-09
Identities = 44/145 (30%), Positives = 69/145 (47%)
Frame = +2
Query: 191 QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 370
++V +SS L ++H + E+MGL++GE D+ V V + + + V +
Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYT----VRVVDVFAMPQSGTGVSV 82
Query: 371 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGI 550
V T + L + G+P VVGWYHSHP W S VD+ TQ ++ ++ V +
Sbjct: 83 EAVDHVFQTNMLDMLK-QTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 141
Query: 551 IFAVFLTDQSTKAPSVQITCFQSIN 625
+ QS K V I F+ IN
Sbjct: 142 VIDPI---QSVKG-KVVIDAFRLIN 162
>01_01_1151 +
9165454-9165580,9165658-9165835,9167256-9167337,
9167907-9168083,9168174-9168341,9168466-9168657
Length = 307
Score = 58.8 bits (136), Expect = 5e-09
Identities = 44/145 (30%), Positives = 69/145 (47%)
Frame = +2
Query: 191 QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 370
++V +SS L ++H + E+MGL++GE D+ V V + + + V +
Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYT----VRVVDVFAMPQSGTGVSV 82
Query: 371 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGI 550
V T + L + G+P VVGWYHSHP W S VD+ TQ ++ ++ V +
Sbjct: 83 EAVDHVFQTNMLDMLK-QTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 141
Query: 551 IFAVFLTDQSTKAPSVQITCFQSIN 625
+ QS K V I F+ IN
Sbjct: 142 VIDPI---QSVKG-KVVIDAFRLIN 162
>05_06_0257 +
26723858-26724049,26724073-26724230,26724886-26725024,
26725130-26725315,26727117-26727310,26728113-26728193,
26728248-26728338,26728414-26728590
Length = 405
Score = 52.4 bits (120), Expect = 5e-07
Identities = 34/111 (30%), Positives = 58/111 (52%)
Frame = +2
Query: 338 RLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSM 517
R ++K DRVE++ E L AT +AE ++ + GW D+ TQ+M
Sbjct: 83 RCERKKDRVEVNPELLAAATAQAE-ISFFPSISVIFEGWTLLVISDLHESYTADVRTQAM 141
Query: 518 YQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRIEIEMEIV 670
+Q M+ FVG+IF+ F ++ + K +Q+ FQS+ G QS + + ++
Sbjct: 142 FQLMEPGFVGLIFSCF-SEDAQKVGKIQVIAFQSLG-GNQQSVVPVNDPVI 190
Score = 45.2 bits (102), Expect = 7e-05
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2
Query: 188 LQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEV 289
L +VR+ +V L C+ HAL+TE EE+MGLL G++
Sbjct: 3 LTEVRIGEEVWLTCLSHALTTETEEVMGLLFGDI 36
>04_04_1418 +
33428527-33428895,33429206-33429280,33429697-33429978,
33430058-33430205,33430309-33430388,33431238-33431318,
33431416-33431514
Length = 377
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 374 EEQLVQATVRAEELAAEV-GQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGI 550
+ + + +V A L ++ G+ VVGWYHSHP W S +D++TQ + Q+ F+ +
Sbjct: 131 DHNVSEVSVFANTLMTDLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAV 190
Query: 551 IFAVFLTDQSTKAPSVQITCFQS 619
+ ++ A V+I F++
Sbjct: 191 VID---PTRTVSAGKVEIGAFRT 210
>01_06_0147 +
26997641-26997688,26997783-26997857,26997966-26998052,
26998566-26998622,26998867-26998959,26999528-26999600,
26999830-26999905,27000217-27000280,27000951-27000980,
27001251-27001367,27002742-27002782,27002870-27003176,
27003279-27003368,27003479-27003541,27003678-27003752,
27003922-27003984,27004714-27004784,27004885-27005068
Length = 537
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 398 VRAEELAAEVG-QPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGIIFA 559
V EE+ A + Q L GW H+HP T + S +DL TQ YQ M V I+ A
Sbjct: 411 VSEEEIHAILSEQSLYPAGWIHTHPSQTCFLSSIDLHTQYSYQVMLPEAVAIVIA 465
>01_05_0018 -
17208358-17208367,17208485-17208537,17209321-17209383,
17209971-17210045,17210090-17210104,17210983-17211045,
17211129-17211218,17211396-17211714,17211814-17211860,
17211949-17212054,17212539-17212592,17212806-17212912,
17212996-17213160,17213383-17213476,17213572-17213636,
17213841-17213969
Length = 484
Score = 35.5 bits (78), Expect = 0.058
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 380 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGIIFA 559
Q QAT E + L +GW H+HP T + S +DL YQ M + I+ A
Sbjct: 417 QKCQATNEEEIFEVQDKGSLFTLGWIHTHPTQTCFLSSIDLHNHYSYQVMLPEAIAIVMA 476
>04_03_0108 -
11340504-11340680,11341580-11341665,11341784-11341827,
11342339-11342428,11343762-11343928,11343986-11344010,
11344636-11344797,11345376-11345422,11345926-11345985,
11346094-11346465
Length = 409
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 236 HALSTEKEEIMGLLIGEVHDNGAL-VSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEE 412
HAL + GLL+G + D A ++VS L P + + + T+ +
Sbjct: 20 HALKHPAAAVNGLLVGRLLDGAASPAAVVSIADAVPLSHHPHHLPLLPTLELALTLVEDH 79
Query: 413 LAAEVGQPLRVVGWYHSH 466
AA Q L VVG+YH++
Sbjct: 80 FAA---QGLAVVGYYHAN 94
>09_06_0187 +
21433842-21433887,21434504-21435246,21435437-21435484,
21435929-21436814,21436967-21437056,21437543-21438417
Length = 895
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Frame = +2
Query: 29 LRESLXXXD*LHG-----NLGTMFNSKNLVILSV*SMLKILKSVTFNRITITNINFEMLQ 193
LR+ D +HG L T++ K+L SV S + SVT N++FEM Q
Sbjct: 634 LRKLQQIIDSVHGAETAFQLNTLY--KDLTNTSVSSDNNLSGSVTVPLANQNNLDFEMHQ 691
Query: 194 KVRLSSDVALVCMQHALSTEKEE 262
RLSS++ + H+ ++ +
Sbjct: 692 HHRLSSNIPSTSLSHSSCSQSSD 714
>05_04_0263 + 19534563-19535522
Length = 319
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 695 NNFETLTQLPTILKEEEDEAFNNEISYDDTDD 790
N+F+T T + E EDE + + YD TDD
Sbjct: 284 NSFDTNTLSERVEDEVEDEDLDEDSDYDSTDD 315
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 635 SQSRIEIEMEI--VTNTDSLLTNNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTKQH 808
+++++E+E + +++L E L T ++E++ AF E D DD+ +
Sbjct: 619 TEAKVELESRLREACEKENILIKTIEELRHALT--RQEQEAAFREERLKRDYDDLQRRYQ 676
Query: 809 NAAVRTIAIGHIVDXMXRPMLKGLVA 886
++ +R + V RP+L+ + A
Sbjct: 677 SSELRYNELVTQVPESTRPLLRQIEA 702
>03_06_0617 -
35124114-35124148,35124243-35124335,35124415-35124919,
35125039-35125238,35125514-35125604,35125699-35126769
Length = 664
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +2
Query: 572 DQSTKAPSVQITCFQSINEG---ASQSRIEIEMEIVTNTDSLLTNNFETLTQLPTILKEE 742
+QS + + C S +G AS ++ E V L NN + T+
Sbjct: 65 EQSVDKKAASLGCHGSETDGNACASGGILDTPSEDVVTVSLGLVNNPDVALDSSTVFASS 124
Query: 743 EDEAFNNEISYDDTDDIVTKQHNAAV 820
+ NE + DD + T + N V
Sbjct: 125 AHKVSQNEENNDDVSHVATHKENMVV 150
>02_05_0710 -
31115116-31115214,31115747-31115851,31116210-31116260,
31116393-31116494,31116651-31116883,31117306-31117497,
31118142-31118322,31118424-31118623,31119105-31119645
Length = 567
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 647 IEIEMEIVTNTDSLLTNN--FETLTQLPTILKEEEDEAFNNEISYDDTDDIVTKQHNAAV 820
I I E + NT L N + L L ++++ +DE ++ YD + TK AA
Sbjct: 489 INIGYEEIVNTQVLAFNGQPVKNLKNLVSMVENCKDEFLKFDLEYDQIVVLETKTAKAAT 548
Query: 821 RTIAIGHIV 847
+ I H +
Sbjct: 549 QDILTTHCI 557
>01_03_0156 +
13279354-13279479,13279722-13279790,13280102-13280272,
13280358-13280464,13281332-13281437,13281540-13281586,
13283429-13283747,13283917-13284006,13284095-13284157,
13284303-13284377,13285379-13285441,13286677-13286700,
13286926-13286978,13287687-13287861
Length = 495
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 437 LRVVGWYHSHPHITVWPSHVDLATQSMYQRMDA 535
L +GW H+HP + + S +DL YQ + A
Sbjct: 384 LFTLGWIHTHPTQSCFLSSIDLHNHYSYQNIIA 416
>01_01_1106 + 8750597-8754031
Length = 1144
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 311 SIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVV 448
S S+ +LRRL + V SE +L+Q + EEL E + LRV+
Sbjct: 1005 SSTSASLLRRLWIRKSDVSSSEWKLLQHRPKLEELTIEYCEMLRVL 1050
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,357,234
Number of Sequences: 37544
Number of extensions: 290988
Number of successful extensions: 721
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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