Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_B03
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein. 200 4e-51
BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 200 4e-51
BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 200 4e-51
BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing ... 200 4e-51
BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing ... 200 4e-51
BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing ... 192 1e-48
S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein. 182 2e-45
BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 181 3e-45
BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 181 3e-45
BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 181 3e-45
BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 181 3e-45
AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing ... 181 3e-45
BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 179 1e-44
BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing ... 179 1e-44
S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha cha... 149 1e-35
BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing ... 98 4e-20
AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subuni... 64 9e-10
U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog prot... 60 1e-08
CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein. 60 1e-08
BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive photo... 60 1e-08
BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive photo... 60 1e-08
BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive photo... 60 1e-08
U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain bin... 59 2e-08
U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated... 57 8e-08
BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome, ma... 57 8e-08
AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein. 56 2e-07
AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN... 53 2e-06
AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN... 53 2e-06
AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein. 53 2e-06
S68020-1|AAB29008.1| 37|Homo sapiens c6.1A protein. 48 6e-05
BX537912-1|CAD97896.1| 234|Homo sapiens hypothetical protein pr... 48 6e-05
AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial prote... 45 4e-04
BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing p... 43 0.001
AK027887-1|BAB55432.1| 451|Homo sapiens protein ( Homo sapiens ... 41 0.005
AC007292-2|AAD24593.1| 448|Homo sapiens R31167_2, partial prote... 41 0.005
U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein. 37 0.11
BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein pr... 37 0.11
BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein pr... 37 0.11
BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein pr... 37 0.11
BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein pr... 37 0.11
AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein. 37 0.11
BC010846-1|AAH10846.2| 436|Homo sapiens STAM binding protein-li... 36 0.15
AL157394-5|CAI13863.1| 270|Homo sapiens novel Mov34/MPN/PAD-1 f... 36 0.15
AL157394-4|CAI13862.1| 461|Homo sapiens novel Mov34/MPN/PAD-1 f... 36 0.15
AL157394-3|CAI13861.1| 436|Homo sapiens novel Mov34/MPN/PAD-1 f... 36 0.15
AB037794-1|BAA92611.1| 463|Homo sapiens KIAA1373 protein protein. 36 0.15
AB010120-1|BAC77766.1| 436|Homo sapiens AMSH-LP protein. 36 0.15
DQ860102-1|ABI64147.1| 1159|Homo sapiens RAD51-associated protei... 31 4.3
BC050665-1|AAH50665.1| 523|Homo sapiens LRRC48 protein protein. 31 7.5
BC050419-1|AAH50419.1| 523|Homo sapiens LRRC48 protein protein. 31 7.5
BC047873-1|AAH47873.1| 523|Homo sapiens leucine rich repeat con... 31 7.5
BC040276-1|AAH40276.1| 457|Homo sapiens LRRC48 protein protein. 31 7.5
>X64643-1|CAA45917.1| 291|Homo sapiens C6.1A protein.
Length = 291
Score = 200 bits (489), Expect = 4e-51
Identities = 118/258 (45%), Positives = 155/258 (60%), Gaps = 25/258 (9%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQSR 646
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI + + R
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYER 186
Query: 647 IEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTKQHNAAVRT 826
IEI + IV + ++ E+ +LP IL +EE +A+ S D VTK HN +V T
Sbjct: 187 IEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDS-VTKIHNGSVFT 244
Query: 827 IAIGHIVDXMXRPMLKGL 880
+ + + P+L+ L
Sbjct: 245 KNLCSQMSAVSGPLLQWL 262
>BX470111-5|CAI41654.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 200 bits (489), Expect = 4e-51
Identities = 118/258 (45%), Positives = 155/258 (60%), Gaps = 25/258 (9%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQSR 646
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI + + R
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYER 186
Query: 647 IEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTKQHNAAVRT 826
IEI + IV + ++ E+ +LP IL +EE +A+ S D VTK HN +V T
Sbjct: 187 IEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDS-VTKIHNGSVFT 244
Query: 827 IAIGHIVDXMXRPMLKGL 880
+ + + P+L+ L
Sbjct: 245 KNLCSQMSAVSGPLLQWL 262
>BX470111-4|CAO03575.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 200 bits (489), Expect = 4e-51
Identities = 118/259 (45%), Positives = 156/259 (60%), Gaps = 26/259 (10%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+ +
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTSRSDSKFAYTGTEMRTVAEK 66
Query: 305 -----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHP 469
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHP
Sbjct: 67 VDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHP 126
Query: 470 HITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQS 643
HITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI + +
Sbjct: 127 HITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYE 186
Query: 644 RIEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTKQHNAAVR 823
RIEI + IV + ++ E+ +LP IL +EE +A+ S D VTK HN +V
Sbjct: 187 RIEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDS-VTKIHNGSVF 244
Query: 824 TIAIGHIVDXMXRPMLKGL 880
T + + + P+L+ L
Sbjct: 245 TKNLCSQMSAVSGPLLQWL 263
>BX293995-3|CAH70538.1| 291|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 291
Score = 200 bits (489), Expect = 4e-51
Identities = 118/258 (45%), Positives = 155/258 (60%), Gaps = 25/258 (9%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQSR 646
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI + + R
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYER 186
Query: 647 IEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTKQHNAAVRT 826
IEI + IV + ++ E+ +LP IL +EE +A+ S D VTK HN +V T
Sbjct: 187 IEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDS-VTKIHNGSVFT 244
Query: 827 IAIGHIVDXMXRPMLKGL 880
+ + + P+L+ L
Sbjct: 245 KNLCSQMSAVSGPLLQWL 262
>BX293995-2|CAO03601.1| 292|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 292
Score = 200 bits (489), Expect = 4e-51
Identities = 118/259 (45%), Positives = 156/259 (60%), Gaps = 26/259 (10%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+ +
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTSRSDSKFAYTGTEMRTVAEK 66
Query: 305 -----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHP 469
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHP
Sbjct: 67 VDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHP 126
Query: 470 HITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSI--NEGASQS 643
HITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI + +
Sbjct: 127 HITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSEYE 186
Query: 644 RIEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTKQHNAAVR 823
RIEI + IV + ++ E+ +LP IL +EE +A+ S D VTK HN +V
Sbjct: 187 RIEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDS-VTKIHNGSVF 244
Query: 824 TIAIGHIVDXMXRPMLKGL 880
T + + + P+L+ L
Sbjct: 245 TKNLCSQMSAVSGPLLQWL 263
>BX470111-2|CAO03574.1| 226|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 226
Score = 192 bits (469), Expect = 1e-48
Identities = 94/156 (60%), Positives = 112/156 (71%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDR 361
+ +Q V L SD LVC+ HALSTEKEE+MGL IGEV D +V I S +ILRR DK+ DR
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGEV-DAVRIVHIHSVIILRRSDKRKDR 65
Query: 362 VEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASF 541
VEIS EQL A+ AE LA G+P+RVVGWYHSHPHITVWPSHVD+ TQ+MYQ MD F
Sbjct: 66 VEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGF 125
Query: 542 VGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRI 649
VG+IF+ F+ D++TK V TCFQSI S +
Sbjct: 126 VGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESL 161
>S68015-1|AAB29005.2| 321|Homo sapiens c6.1A protein.
Length = 321
Score = 182 bits (443), Expect = 2e-45
Identities = 120/283 (42%), Positives = 156/283 (55%), Gaps = 50/283 (17%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 12 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 71
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 72 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 131
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSIN--------- 625
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI
Sbjct: 132 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESLH 191
Query: 626 --------------EGASQ----SRIEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDE 751
EG + RIEI + IV + ++ E+ +LP IL +EE +
Sbjct: 192 GPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHV-TIWKVCLESAVELPKILCQEEQD 250
Query: 752 AFNNEISYDDTDDIVTKQHNAAVRTIAIGHIVDXMXRPMLKGL 880
A+ S D VTK HN +V T + + + P+L+ L
Sbjct: 251 AYRRIHSLTHLDS-VTKIHNGSVFTKNLCSQMSAVSGPLLQWL 292
>BX470111-3|CAI41655.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 181 bits (441), Expect = 3e-45
Identities = 120/283 (42%), Positives = 156/283 (55%), Gaps = 50/283 (17%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSIN--------- 625
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESLH 186
Query: 626 --------------EGASQ----SRIEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDE 751
EG + RIEI + IV + ++ E+ +LP IL +EE +
Sbjct: 187 GPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQD 245
Query: 752 AFNNEISYDDTDDIVTKQHNAAVRTIAIGHIVDXMXRPMLKGL 880
A+ S D VTK HN +V T + + + P+L+ L
Sbjct: 246 AYRRIHSLTHLDS-VTKIHNGSVFTKNLCSQMSAVSGPLLQWL 287
>BX293995-1|CAH70537.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 181 bits (441), Expect = 3e-45
Identities = 120/283 (42%), Positives = 156/283 (55%), Gaps = 50/283 (17%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSIN--------- 625
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESLH 186
Query: 626 --------------EGASQ----SRIEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDE 751
EG + RIEI + IV + ++ E+ +LP IL +EE +
Sbjct: 187 GPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQD 245
Query: 752 AFNNEISYDDTDDIVTKQHNAAVRTIAIGHIVDXMXRPMLKGL 880
A+ S D VTK HN +V T + + + P+L+ L
Sbjct: 246 AYRRIHSLTHLDS-VTKIHNGSVFTKNLCSQMSAVSGPLLQWL 287
>BC006540-1|AAH06540.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 181 bits (441), Expect = 3e-45
Identities = 120/283 (42%), Positives = 156/283 (55%), Gaps = 50/283 (17%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSIN--------- 625
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESLH 186
Query: 626 --------------EGASQ----SRIEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDE 751
EG + RIEI + IV + ++ E+ +LP IL +EE +
Sbjct: 187 GPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQD 245
Query: 752 AFNNEISYDDTDDIVTKQHNAAVRTIAIGHIVDXMXRPMLKGL 880
A+ S D VTK HN +V T + + + P+L+ L
Sbjct: 246 AYRRIHSLTHLDS-VTKIHNGSVFTKNLCSQMSAVSGPLLQWL 287
>BC002999-1|AAH02999.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 316
Score = 181 bits (441), Expect = 3e-45
Identities = 120/283 (42%), Positives = 156/283 (55%), Gaps = 50/283 (17%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSIN--------- 625
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESLH 186
Query: 626 --------------EGASQ----SRIEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDE 751
EG + RIEI + IV + ++ E+ +LP IL +EE +
Sbjct: 187 GPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQD 245
Query: 752 AFNNEISYDDTDDIVTKQHNAAVRTIAIGHIVDXMXRPMLKGL 880
A+ S D VTK HN +V T + + + P+L+ L
Sbjct: 246 AYRRIHSLTHLDS-VTKIHNGSVFTKNLCSQMSAVSGPLLQWL 287
>AY438030-1|AAR30498.1| 316|Homo sapiens BRCA1/BRCA2-containing
complex subunit 36 protein.
Length = 316
Score = 181 bits (441), Expect = 3e-45
Identities = 120/283 (42%), Positives = 156/283 (55%), Gaps = 50/283 (17%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSIN--------- 625
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSESLH 186
Query: 626 --------------EGASQ----SRIEIEMEIVTNTDSLLTNNFETLTQLPTILKEEEDE 751
EG + RIEI + IV + ++ E+ +LP IL +EE +
Sbjct: 187 GPRDFWSSSQHISIEGQKEEERYERIEIPIHIVPHV-TIGKVCLESAVELPKILCQEEQD 245
Query: 752 AFNNEISYDDTDDIVTKQHNAAVRTIAIGHIVDXMXRPMLKGL 880
A+ S D VTK HN +V T + + + P+L+ L
Sbjct: 246 AYRRIHSLTHLDS-VTKIHNGSVFTKNLCSQMSAVSGPLLQWL 287
>BX470111-6|CAO03576.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 179 bits (436), Expect = 1e-44
Identities = 96/196 (48%), Positives = 120/196 (61%), Gaps = 23/196 (11%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRIE 652
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI S
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSDLTH 186
Query: 653 IEMEIVTNTDSLLTNN 700
++ + S+ T N
Sbjct: 187 LDSVTKIHNGSVFTKN 202
>BX293995-4|CAO03602.1| 247|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 247
Score = 179 bits (436), Expect = 1e-44
Identities = 96/196 (48%), Positives = 120/196 (61%), Gaps = 23/196 (11%)
Frame = +2
Query: 182 EMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGA------------------- 304
+ +Q V L SD LVC+ HALSTEKEE+MGL IGE++D+
Sbjct: 7 QAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKV 66
Query: 305 ----LVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPH 472
+V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWYHSHPH
Sbjct: 67 DAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPH 126
Query: 473 ITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSINEGASQSRIE 652
ITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI S
Sbjct: 127 ITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKSSDLTH 186
Query: 653 IEMEIVTNTDSLLTNN 700
++ + S+ T N
Sbjct: 187 LDSVTKIHNGSVFTKN 202
>S72931-1|AAB30469.2| 363|Homo sapiens T-cell receptor alpha
chain-c6.1A fusion protein protein.
Length = 363
Score = 149 bits (361), Expect = 1e-35
Identities = 71/124 (57%), Positives = 86/124 (69%)
Frame = +2
Query: 278 IGEVHDNGALVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWY 457
+ E D +V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWY
Sbjct: 18 VAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWY 77
Query: 458 HSHPHITVWPSHVDLATQSMYQRMDASFVGIIFAVFLTDQSTKAPSVQITCFQSINEGAS 637
HSHPHITVWPSHVD+ TQ+MYQ MD FVG+IF+ F+ D++TK V TCFQSI S
Sbjct: 78 HSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQKS 137
Query: 638 QSRI 649
+
Sbjct: 138 SESL 141
>BX470111-1|CAO03573.1| 90|Homo sapiens BRCA1/BRCA2-containing
complex, subunit 3 protein.
Length = 90
Score = 97.9 bits (233), Expect = 4e-20
Identities = 46/73 (63%), Positives = 53/73 (72%)
Frame = +2
Query: 278 IGEVHDNGALVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWY 457
+ E D +V I S +ILRR DK+ DRVEIS EQL A+ AE LA G+P+RVVGWY
Sbjct: 4 VAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWY 63
Query: 458 HSHPHITVWPSHV 496
HSHPHITVWPSHV
Sbjct: 64 HSHPHITVWPSHV 76
>AB209134-1|BAD92371.1| 276|Homo sapiens COP9 signalosome subunit 5
variant protein.
Length = 276
Score = 63.7 bits (148), Expect = 9e-10
Identities = 40/135 (29%), Positives = 68/135 (50%)
Frame = +2
Query: 149 FNRITITNINFEMLQKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSV 328
FN I I + + ++S+ L + HA S E+MGL++G+V +G + I+ S
Sbjct: 8 FNYIVILFCSHHYFKYCKISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSF 65
Query: 329 ILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLAT 508
L ++ RV ++ + E A +VG+ +GWYHSHP W S +D++T
Sbjct: 66 ALP-VEGTETRVN-AQAAAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVST 123
Query: 509 QSMYQRMDASFVGII 553
Q + Q+ FV ++
Sbjct: 124 QMLNQQFQEPFVAVV 138
>U70734-1|AAD03468.1| 334|Homo sapiens 38 kDa Mov34 homolog
protein.
Length = 334
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/118 (30%), Positives = 62/118 (52%)
Frame = +2
Query: 200 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 379
++S+ L + HA S E+MGL++G+V +G + I+ S L ++ RV ++
Sbjct: 56 KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111
Query: 380 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
+ E A +VG+ +GWYHSHP W S +D++TQ + Q+ FV ++
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVV 169
>CR541678-1|CAG46479.1| 334|Homo sapiens COPS5 protein.
Length = 334
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/118 (30%), Positives = 62/118 (52%)
Frame = +2
Query: 200 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 379
++S+ L + HA S E+MGL++G+V +G + I+ S L ++ RV ++
Sbjct: 56 KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111
Query: 380 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
+ E A +VG+ +GWYHSHP W S +D++TQ + Q+ FV ++
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVV 169
>BC007272-1|AAH07272.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/118 (30%), Positives = 62/118 (52%)
Frame = +2
Query: 200 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 379
++S+ L + HA S E+MGL++G+V +G + I+ S L ++ RV ++
Sbjct: 56 KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111
Query: 380 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
+ E A +VG+ +GWYHSHP W S +D++TQ + Q+ FV ++
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVV 169
>BC001859-1|AAH01859.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/118 (30%), Positives = 62/118 (52%)
Frame = +2
Query: 200 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 379
++S+ L + HA S E+MGL++G+V +G + I+ S L ++ RV ++
Sbjct: 56 KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111
Query: 380 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
+ E A +VG+ +GWYHSHP W S +D++TQ + Q+ FV ++
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVV 169
>BC001187-1|AAH01187.1| 334|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 5 (Arabidopsis)
protein.
Length = 334
Score = 59.7 bits (138), Expect = 1e-08
Identities = 36/118 (30%), Positives = 62/118 (52%)
Frame = +2
Query: 200 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 379
++S+ L + HA S E+MGL++G+V +G + I+ S L ++ RV ++
Sbjct: 56 KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111
Query: 380 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
+ E A +VG+ +GWYHSHP W S +D++TQ + Q+ FV ++
Sbjct: 112 AAYEYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVV 169
>U65928-1|AAB16847.1| 334|Homo sapiens Jun activation domain
binding protein protein.
Length = 334
Score = 59.3 bits (137), Expect = 2e-08
Identities = 36/118 (30%), Positives = 61/118 (51%)
Frame = +2
Query: 200 RLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEE 379
++S+ L + HA S E+MGL++G+V +G + I+ S L ++ RV ++
Sbjct: 56 KISALALLKMVMHARSGGNLEVMGLMLGKV--DGETMIIMDSFALP-VEGTETRVN-AQA 111
Query: 380 QLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
+ E A +VG +GWYHSHP W S +D++TQ + Q+ FV ++
Sbjct: 112 AAYEYMAAYIENAKQVGHLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVV 169
>U86782-1|AAC51866.1| 310|Homo sapiens 26S proteasome-associated
pad1 homolog protein.
Length = 310
Score = 57.2 bits (132), Expect = 8e-08
Identities = 44/145 (30%), Positives = 70/145 (48%)
Frame = +2
Query: 191 QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 370
++V +SS L ++H + E+MGL++GE D+ + I V VE
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVI--DVFAMPQSGTGVSVE- 85
Query: 371 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGI 550
+ + + QA + ++ + G+P VVGWYHSHP W S VD+ TQ ++ + V +
Sbjct: 86 AVDPVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 143
Query: 551 IFAVFLTDQSTKAPSVQITCFQSIN 625
+ QS K V I F+ IN
Sbjct: 144 VVDPI---QSVKG-KVVIDAFRLIN 164
>BC066336-1|AAH66336.1| 310|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 14 protein.
Length = 310
Score = 57.2 bits (132), Expect = 8e-08
Identities = 44/145 (30%), Positives = 70/145 (48%)
Frame = +2
Query: 191 QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 370
++V +SS L ++H + E+MGL++GE D+ + I V VE
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVI--DVFAMPQSGTGVSVE- 85
Query: 371 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGI 550
+ + + QA + ++ + G+P VVGWYHSHP W S VD+ TQ ++ + V +
Sbjct: 86 AVDPVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 143
Query: 551 IFAVFLTDQSTKAPSVQITCFQSIN 625
+ QS K V I F+ IN
Sbjct: 144 VVDPI---QSVKG-KVVIDAFRLIN 164
>AC009299-2|AAX88940.1| 154|Homo sapiens unknown protein.
Length = 154
Score = 56.0 bits (129), Expect = 2e-07
Identities = 36/121 (29%), Positives = 61/121 (50%)
Frame = +2
Query: 191 QKVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEI 370
++V +SS L ++H + E+MGL++GE D+ + I V VE
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVI--DVFAMPQSGTGVSVE- 85
Query: 371 SEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGI 550
+ + + QA + ++ + G+P VVGWYHSHP W S VD+ TQ ++ + V +
Sbjct: 86 AVDPVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 143
Query: 551 I 553
+
Sbjct: 144 V 144
>AL450024-1|CAH70737.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 52.8 bits (121), Expect = 2e-06
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = +2
Query: 194 KVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEIS 373
+V+++S+ L+ HA E++GLL G + +V + ++ L
Sbjct: 576 QVKVASEALLIMDLHA-HVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQ----C 630
Query: 374 EEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQ----RMDASF 541
E V T +E LA + V+GWYHSHP PS D+ TQ+ YQ R A F
Sbjct: 631 EMDPVSQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKF 687
Query: 542 VGIIFAVFLTDQSTKAPSVQITC 610
+G+I + + +++ P QITC
Sbjct: 688 IGMIVSPY--NRNNPLPYSQITC 708
>AL035411-1|CAI21908.1| 828|Homo sapiens myb-like, SWIRM and MPN
domains 1 protein.
Length = 828
Score = 52.8 bits (121), Expect = 2e-06
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = +2
Query: 194 KVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEIS 373
+V+++S+ L+ HA E++GLL G + +V + ++ L
Sbjct: 576 QVKVASEALLIMDLHA-HVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQ----C 630
Query: 374 EEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQ----RMDASF 541
E V T +E LA + V+GWYHSHP PS D+ TQ+ YQ R A F
Sbjct: 631 EMDPVSQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKF 687
Query: 542 VGIIFAVFLTDQSTKAPSVQITC 610
+G+I + + +++ P QITC
Sbjct: 688 IGMIVSPY--NRNNPLPYSQITC 708
>AB067502-1|BAB67808.1| 726|Homo sapiens KIAA1915 protein protein.
Length = 726
Score = 52.8 bits (121), Expect = 2e-06
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Frame = +2
Query: 194 KVRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEIS 373
+V+++S+ L+ HA E++GLL G + +V + ++ L
Sbjct: 474 QVKVASEALLIMDLHA-HVSMAEVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQ----C 528
Query: 374 EEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQ----RMDASF 541
E V T +E LA + V+GWYHSHP PS D+ TQ+ YQ R A F
Sbjct: 529 EMDPVSQTQASETLAV---RGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKF 585
Query: 542 VGIIFAVFLTDQSTKAPSVQITC 610
+G+I + + +++ P QITC
Sbjct: 586 IGMIVSPY--NRNNPLPYSQITC 606
>S68020-1|AAB29008.1| 37|Homo sapiens c6.1A protein.
Length = 37
Score = 47.6 bits (108), Expect = 6e-05
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2
Query: 209 SDVALVCMQHALSTEKEEIMGLLIGEVHD 295
SD LVC+ HALSTEKEE+MGL IGE+ +
Sbjct: 2 SDAFLVCLNHALSTEKEEVMGLCIGEIQN 30
>BX537912-1|CAD97896.1| 234|Homo sapiens hypothetical protein
protein.
Length = 234
Score = 47.6 bits (108), Expect = 6e-05
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Frame = +2
Query: 260 EIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISEEQLVQATVRAEELAAEVGQPL 439
E++GLL G + +V + ++ L E V T +E LA +
Sbjct: 3 EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQ----CEMDPVSQTQASETLAV---RGF 55
Query: 440 RVVGWYHSHPHITVWPSHVDLATQSMYQ----RMDASFVGIIFAVFLTDQSTKAPSVQIT 607
V+GWYHSHP PS D+ TQ+ YQ R A F+G+I + + +++ P QIT
Sbjct: 56 SVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVSPY--NRNNPLPYSQIT 113
Query: 608 C 610
C
Sbjct: 114 C 114
>AC007292-1|AAD24592.1| 498|Homo sapiens R31167_1, partial protein
protein.
Length = 498
Score = 44.8 bits (101), Expect = 4e-04
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Frame = +2
Query: 197 VRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISE 376
V +SS+V + H+ T + E++G L G N +++++ + R + E
Sbjct: 269 VAVSSNVLFLLDFHSHLT-RSEVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAIE 327
Query: 377 EQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQ-RMDASFVGI- 550
E++ Q+ + L +VGWYHSHPH PS D+ Q YQ R+ S G
Sbjct: 328 EEIYQSLFL---------RGLSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQ 378
Query: 551 -IFAVFLTD--QSTKAPSVQITCFQSI---NEGASQSRIEIEMEIVTNTDSLLTNN 700
A+ + P +I+ F + + S I +++E+ DS LTN+
Sbjct: 379 PCLALLCSPYYSGNPGPESKISPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFLTND 434
>BC032652-1|AAH32652.1| 471|Homo sapiens MPN domain containing
protein.
Length = 471
Score = 43.2 bits (97), Expect = 0.001
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = +2
Query: 197 VRLSSDVALVCMQHALSTEKEEIMGLLIGEVHDNGALVSIVSSVILRRLDKKPDRVEISE 376
V +SS+V + H+ T + E++G L G N +++++ + R + E
Sbjct: 272 VAVSSNVLFLLDFHSHLT-RSEVVGYLGGRWDVNSQMLTVLRAFPCRSRLGDAETAAAIE 330
Query: 377 EQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSMYQ-RMDASFVG 547
E++ Q+ + L +VGWYHSHPH PS D+ Q YQ R+ S G
Sbjct: 331 EEIYQSLFL---------RGLSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNG 379
>AK027887-1|BAB55432.1| 451|Homo sapiens protein ( Homo sapiens
cDNA FLJ14981 fis, clone Y79AA1000202. ).
Length = 451
Score = 41.1 bits (92), Expect = 0.005
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Frame = +2
Query: 437 LRVVGWYHSHPHITVWPSHVDLATQSMYQ-RMDASFVGI--IFAVFLTD--QSTKAPSVQ 601
L +VGWYHSHPH PS D+ Q YQ R+ S G A+ + P +
Sbjct: 292 LSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCSPYYSGNPGPESK 351
Query: 602 ITCFQSI---NEGASQSRIEIEMEIVTNTDSLLTNN 700
I+ F + + S I +++E+ DS LTN+
Sbjct: 352 ISPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFLTND 387
>AC007292-2|AAD24593.1| 448|Homo sapiens R31167_2, partial protein
protein.
Length = 448
Score = 41.1 bits (92), Expect = 0.005
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Frame = +2
Query: 437 LRVVGWYHSHPHITVWPSHVDLATQSMYQ-RMDASFVGI--IFAVFLTD--QSTKAPSVQ 601
L +VGWYHSHPH PS D+ Q YQ R+ S G A+ + P +
Sbjct: 289 LSLVGWYHSHPHSPALPSLQDIDAQMDYQLRLQGSSNGFQPCLALLCSPYYSGNPGPESK 348
Query: 602 ITCFQSI---NEGASQSRIEIEMEIVTNTDSLLTNN 700
I+ F + + S I +++E+ DS LTN+
Sbjct: 349 ISPFWVMPPPEQRPSDYGIPMDVEMAYVQDSFLTND 384
>U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 431 QPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
Q L +GW H+HP T + S VDL T YQ M V I+
Sbjct: 326 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIV 366
>BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 431 QPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
Q L +GW H+HP T + S VDL T YQ M V I+
Sbjct: 326 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIV 366
>BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 431 QPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
Q L +GW H+HP T + S VDL T YQ M V I+
Sbjct: 326 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIV 366
>BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 431 QPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
Q L +GW H+HP T + S VDL T YQ M V I+
Sbjct: 326 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIV 366
>BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 431 QPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
Q L +GW H+HP T + S VDL T YQ M V I+
Sbjct: 326 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIV 366
>AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein.
Length = 424
Score = 36.7 bits (81), Expect = 0.11
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 431 QPLRVVGWYHSHPHITVWPSHVDLATQSMYQRMDASFVGII 553
Q L +GW H+HP T + S VDL T YQ M V I+
Sbjct: 326 QGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIV 366
>BC010846-1|AAH10846.2| 436|Homo sapiens STAM binding protein-like
1 protein.
Length = 436
Score = 36.3 bits (80), Expect = 0.15
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +2
Query: 164 ITNINFEMLQKVRLSSDVALVCMQHALSTEKE--EIMGLLIGEVHDNGALVSIVSSVILR 337
+ N+ E L+ V L D+ +Q A S E G+L G++ N ++ VI+
Sbjct: 258 VQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTIT---HVIVP 314
Query: 338 RLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSM 517
+ PD ++ + E + L +GW H+HP T + S VDL T
Sbjct: 315 KQSAGPDYCDMENVE--------ELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCS 366
Query: 518 YQRMDASFVGII 553
YQ M + I+
Sbjct: 367 YQLMLPEAIAIV 378
>AL157394-5|CAI13863.1| 270|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 270
Score = 36.3 bits (80), Expect = 0.15
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +2
Query: 164 ITNINFEMLQKVRLSSDVALVCMQHALSTEKE--EIMGLLIGEVHDNGALVSIVSSVILR 337
+ N+ E L+ V L D+ +Q A S E G+L G++ N ++ VI+
Sbjct: 92 VQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTIT---HVIVP 148
Query: 338 RLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSM 517
+ PD ++ + E + L +GW H+HP T + S VDL T
Sbjct: 149 KQSAGPDYCDMENVE--------ELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCS 200
Query: 518 YQRMDASFVGII 553
YQ M + I+
Sbjct: 201 YQLMLPEAIAIV 212
>AL157394-4|CAI13862.1| 461|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 461
Score = 36.3 bits (80), Expect = 0.15
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +2
Query: 164 ITNINFEMLQKVRLSSDVALVCMQHALSTEKE--EIMGLLIGEVHDNGALVSIVSSVILR 337
+ N+ E L+ V L D+ +Q A S E G+L G++ N ++ VI+
Sbjct: 258 VQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTIT---HVIVP 314
Query: 338 RLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSM 517
+ PD ++ + E + L +GW H+HP T + S VDL T
Sbjct: 315 KQSAGPDYCDMENVE--------ELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCS 366
Query: 518 YQRMDASFVGII 553
YQ M + I+
Sbjct: 367 YQLMLPEAIAIV 378
>AL157394-3|CAI13861.1| 436|Homo sapiens novel Mov34/MPN/PAD-1
family domain containing protein (FLJ31524) protein.
Length = 436
Score = 36.3 bits (80), Expect = 0.15
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +2
Query: 164 ITNINFEMLQKVRLSSDVALVCMQHALSTEKE--EIMGLLIGEVHDNGALVSIVSSVILR 337
+ N+ E L+ V L D+ +Q A S E G+L G++ N ++ VI+
Sbjct: 258 VQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTIT---HVIVP 314
Query: 338 RLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSM 517
+ PD ++ + E + L +GW H+HP T + S VDL T
Sbjct: 315 KQSAGPDYCDMENVE--------ELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCS 366
Query: 518 YQRMDASFVGII 553
YQ M + I+
Sbjct: 367 YQLMLPEAIAIV 378
>AB037794-1|BAA92611.1| 463|Homo sapiens KIAA1373 protein protein.
Length = 463
Score = 36.3 bits (80), Expect = 0.15
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +2
Query: 164 ITNINFEMLQKVRLSSDVALVCMQHALSTEKE--EIMGLLIGEVHDNGALVSIVSSVILR 337
+ N+ E L+ V L D+ +Q A S E G+L G++ N ++ VI+
Sbjct: 260 VQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTIT---HVIVP 316
Query: 338 RLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSM 517
+ PD ++ + E + L +GW H+HP T + S VDL T
Sbjct: 317 KQSAGPDYCDMENVE--------ELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCS 368
Query: 518 YQRMDASFVGII 553
YQ M + I+
Sbjct: 369 YQLMLPEAIAIV 380
>AB010120-1|BAC77766.1| 436|Homo sapiens AMSH-LP protein.
Length = 436
Score = 36.3 bits (80), Expect = 0.15
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +2
Query: 164 ITNINFEMLQKVRLSSDVALVCMQHALSTEKE--EIMGLLIGEVHDNGALVSIVSSVILR 337
+ N+ E L+ V L D+ +Q A S E G+L G++ N ++ VI+
Sbjct: 258 VQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTIT---HVIVP 314
Query: 338 RLDKKPDRVEISEEQLVQATVRAEELAAEVGQPLRVVGWYHSHPHITVWPSHVDLATQSM 517
+ PD ++ + E + L +GW H+HP T + S VDL T
Sbjct: 315 KQSAGPDYCDMENVE--------ELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCS 366
Query: 518 YQRMDASFVGII 553
YQ M + I+
Sbjct: 367 YQLMLPEAIAIV 378
>DQ860102-1|ABI64147.1| 1159|Homo sapiens RAD51-associated protein 2
protein.
Length = 1159
Score = 31.5 bits (68), Expect = 4.3
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 638 QSRIEIEMEIVTNTD-SLLTNNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTKQHNA 814
Q + ++I+ T+ + L NNF++LT++ + EE+ F + +IV
Sbjct: 569 QDSVSEPLDILLKTNIAFLLNNFDSLTRIENDFELEEECIFKCMLYLKYPKNIVENHTAY 628
Query: 815 AVRTIAIGHIVDXMXRPMLK 874
V+ + +++ +PMLK
Sbjct: 629 LVKILTSSRLLEDNMKPMLK 648
>BC050665-1|AAH50665.1| 523|Homo sapiens LRRC48 protein protein.
Length = 523
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 695 NNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTK 802
NN ET+ L T++ E+ FNN IS D+ D + K
Sbjct: 97 NNIETIEGLDTLVNLEDLSLFNNRISKIDSLDALVK 132
>BC050419-1|AAH50419.1| 523|Homo sapiens LRRC48 protein protein.
Length = 523
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 695 NNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTK 802
NN ET+ L T++ E+ FNN IS D+ D + K
Sbjct: 97 NNIETIEGLDTLVNLEDLSLFNNRISKIDSLDALVK 132
>BC047873-1|AAH47873.1| 523|Homo sapiens leucine rich repeat
containing 48 protein.
Length = 523
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 695 NNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTK 802
NN ET+ L T++ E+ FNN IS D+ D + K
Sbjct: 97 NNIETIEGLDTLVNLEDLSLFNNRISKIDSLDALVK 132
>BC040276-1|AAH40276.1| 457|Homo sapiens LRRC48 protein protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 695 NNFETLTQLPTILKEEEDEAFNNEISYDDTDDIVTK 802
NN ET+ L T++ E+ FNN IS D+ D + K
Sbjct: 97 NNIETIEGLDTLVNLEDLSLFNNRISKIDSLDALVK 132
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,276,243
Number of Sequences: 237096
Number of extensions: 1660616
Number of successful extensions: 3688
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3672
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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