Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_A18
(973 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.54
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 32 0.54
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 26 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 26 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 26 1.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 25 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 8.7
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.54
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +3
Query: 375 PTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKXPHPPP 518
P P + T P T P PP P P+ Q P PPP
Sbjct: 454 PISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 32.3 bits (70), Expect = 0.54
Identities = 20/70 (28%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = +1
Query: 388 PXNTXEQGPXXSPXQXPPPXXKXHPXXPXXNAPXPT-KXXPTPRXX-KNTPXNXXQXXAX 561
P E P P P P +P P P K P P+ K+ P +
Sbjct: 213 PKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPK 272
Query: 562 PKXHPTPXPN 591
PK +P P PN
Sbjct: 273 PKPNPKPEPN 282
Score = 31.9 bits (69), Expect = 0.71
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 PXNTXEQGPXXSPXQXPPPXXKXHPXXPXXNAPXPT-KXXPTPRXXKNTPXNXXQXXAXP 564
P E P P P P K P P P K P P+ K P + P
Sbjct: 169 PKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKP-KPKPEPKPKPKPKP 227
Query: 565 KXHPTPXPN 591
K P P PN
Sbjct: 228 KPKPKPNPN 236
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/67 (28%), Positives = 22/67 (32%)
Frame = +1
Query: 388 PXNTXEQGPXXSPXQXPPPXXKXHPXXPXXNAPXPTKXXPTPRXXKNTPXNXXQXXAXPK 567
P + P P P P K P P P K P P+ N P + PK
Sbjct: 191 PKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKP-KPKPKPKPNPN-PKPEPKPKPKPK 248
Query: 568 XHPTPXP 588
P P P
Sbjct: 249 PKPEPKP 255
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +1
Query: 412 PXXSPXQXPPPXXKXHPXXPXXNAPXPT-KXXPTPRXXKNTPXNXXQXXAXPKXHPTPXP 588
P P P P K P P P K P P+ K P + PK P P P
Sbjct: 187 PKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKP-KPKPKPKPKPNPNPKPEPKPKP 245
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/68 (27%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +1
Query: 388 PXNTXEQGPXXSPXQXPPPXXKXHPXXPXXNAPXPTKXXPTPRXX-KNTPXNXXQXXAXP 564
P + P P P P K P P P K P P+ K P + P
Sbjct: 155 PKLKSKPNPKPEPKPKPKPEPKPKPKPDPKPKPKP-KPKPKPKPNPKPEPKPKPKPEPKP 213
Query: 565 KXHPTPXP 588
K P P P
Sbjct: 214 KPKPEPKP 221
Score = 28.3 bits (60), Expect = 8.7
Identities = 27/127 (21%), Positives = 31/127 (24%)
Frame = +1
Query: 412 PXXSPXQXPPPXXKXHPXXPXXNAPXPTKXXPTPRXXKNTPXNXXQXXAXPKXHPTPXPN 591
P P P P K P P P K P P+ P + PK P P P
Sbjct: 167 PKPKPKPEPKPKPKPDPKPKPKPKPKP-KPKPNPKPEPK-PKPKPEPKPKPKPEPKPKPK 224
Query: 592 XAXXXXXXXXXXXXXXXXXXXXXXXXXXPPPXRXXXXXXXPXXXXLXXKPXKKXXPXPPP 771
P P P L KP P P P
Sbjct: 225 PKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKP-KPKLKPKPKPNPKPEPNP 283
Query: 772 PXQKXPQ 792
+ P+
Sbjct: 284 MPELKPK 290
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 397 TXEQGPXXSPXQXPPPXXKXHPXXPXXNAPXP--TKXXPTPRXXKNTPXNXXQXXAXPKX 570
T E P + PPP K P P AP P TK P P K P
Sbjct: 171 TTEAPPPPTTKAPPPPTTKA-PPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVT 229
Query: 571 HPTPXP 588
P P P
Sbjct: 230 APAPNP 235
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 26.2 bits (55), Expect(2) = 1.9
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 375 PTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKXPHPPP 518
P P P P P PP PPP P PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 22.6 bits (46), Expect(2) = 1.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3
Query: 636 PXXXPXPXXXGAXPPPPP 689
P P P PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 26.2 bits (55), Expect(2) = 1.9
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 375 PTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKXPHPPP 518
P P P P P PP PPP P PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 22.6 bits (46), Expect(2) = 1.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3
Query: 636 PXXXPXPXXXGAXPPPPP 689
P P P PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 26.2 bits (55), Expect(2) = 1.9
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = +3
Query: 375 PTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKXPHPPP 518
P P P P P PP PPP P PPP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 22.6 bits (46), Expect(2) = 1.9
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3
Query: 636 PXXXPXPXXXGAXPPPPP 689
P P P PPPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPP 371
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/71 (25%), Positives = 19/71 (26%)
Frame = +3
Query: 318 EXPXTNHPXXHPQXRPNGXPTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYX 497
E P HP H PN P H + P P PP P Y
Sbjct: 58 EHPAQQHPPQHHSVPPNSFAPPPGQHHPQ-HPGMPPMEWRPPGAEYQMPPGYPAGYPPYG 116
Query: 498 KXPHPPPXKKH 530
P P H
Sbjct: 117 MPPRHHPGYPH 127
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +3
Query: 324 PXTNHPXXHPQXRPNGXPTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKX 503
P T+ PQ P G P P P P PP PP Y
Sbjct: 701 PPTSVQPPQPQQPPQGPPGPPGP-QQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYP 759
Query: 504 PHPPP 518
P PP
Sbjct: 760 PGAPP 764
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 306 FSXXEXPXTNHPXXHPQXRPNGXPTPXAPXHXRTRPXTXP 425
F + T P Q +P+G P+ +P H R P T P
Sbjct: 433 FDRKDDDETYEPYQGGQAQPDGSPSEYSPNHVRRGPKTPP 472
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/61 (29%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Frame = +3
Query: 351 PQXRPNGXPTPXAPX-----HXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKXPHPP 515
P P+ PT P + T P T P PP P P+ Q P PP
Sbjct: 434 PPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 493
Query: 516 P 518
P
Sbjct: 494 P 494
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +3
Query: 648 PXPXXXGAXPPPPPXXXTXXXSXXXXPXXXTXKKXTXXXPPXXTEXPPXXNGXQPAPPHX 827
P + PPPPP T T PP PP +G P PP
Sbjct: 756 PIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPS-TSSVPPPPPPLPPISSGAPPPPPPP 814
Query: 828 NP 833
P
Sbjct: 815 PP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = +3
Query: 648 PXPXXXGAXPPPPPXXXTXXXSXXXXPXXXTXKKXTXXXPPXXTEXPPXXNGXQPAPPHX 827
P + PPPPP T T PP PP +G P PP
Sbjct: 756 PIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPS-TSSVPPPPPPLPPISSGAPPPPPPP 814
Query: 828 NP 833
P
Sbjct: 815 PP 816
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 25.4 bits (53), Expect(2) = 4.8
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 411 PXTXPXXXXPPXXXXPPPAXXXQRTXXYXKXPHPPP 518
P P PP PPP Q P PPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
Score = 22.2 bits (45), Expect(2) = 4.8
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3
Query: 636 PXXXPXPXXXGAXPPPPP 689
P P P PPPPP
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/129 (21%), Positives = 32/129 (24%), Gaps = 3/129 (2%)
Frame = +3
Query: 456 PPPAXXXQRTXXYXKXPH-PPPXKKHXX*PXTTXRXXXXTPNPXXXXXXXXXXXXXXXXX 632
PPP ++ + P PPP P TP P
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP- 303
Query: 633 XPXXXPXPXXXGAXPPPPP--XXXTXXXSXXXXPXXXTXKKXTXXXPPXXTEXPPXXNGX 806
P P P PPPPP P + PP P G
Sbjct: 304 -PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 362
Query: 807 QPAPPHXNP 833
P PP P
Sbjct: 363 YPPPPPSRP 371
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +3
Query: 348 HPQXRPNGXPTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKXPHPPPXKK 527
+PQ P AP P P P P PA Q+ PH PP
Sbjct: 87 YPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPP 146
Query: 528 HXX*P 542
H P
Sbjct: 147 HYPPP 151
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/129 (21%), Positives = 32/129 (24%), Gaps = 3/129 (2%)
Frame = +3
Query: 456 PPPAXXXQRTXXYXKXPH-PPPXKKHXX*PXTTXRXXXXTPNPXXXXXXXXXXXXXXXXX 632
PPP ++ + P PPP P TP P
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP- 313
Query: 633 XPXXXPXPXXXGAXPPPPP--XXXTXXXSXXXXPXXXTXKKXTXXXPPXXTEXPPXXNGX 806
P P P PPPPP P + PP P G
Sbjct: 314 -PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 372
Query: 807 QPAPPHXNP 833
P PP P
Sbjct: 373 YPPPPPSRP 381
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.6
Identities = 32/105 (30%), Positives = 32/105 (30%)
Frame = -1
Query: 688 GGGGGXAPXXXGXGSXXGXLFXVLGLGRXXVPGXGXGLGVFXXXRXVVXG*XXCFFXGGG 509
GGGGG AP G G G G G G G G G C GGG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGG---GCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
Query: 508 WGXFX*XXVRXXXXAGGGXXXXGGXFXXGXVXGLVLXCXGAXGVG 374
G GGG GG G G C G G G
Sbjct: 124 CGG------GGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.6
Identities = 32/105 (30%), Positives = 32/105 (30%)
Frame = -1
Query: 688 GGGGGXAPXXXGXGSXXGXLFXVLGLGRXXVPGXGXGLGVFXXXRXVVXG*XXCFFXGGG 509
GGGGG AP G G G G G G G G G C GGG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGG---GCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
Query: 508 WGXFX*XXVRXXXXAGGGXXXXGGXFXXGXVXGLVLXCXGAXGVG 374
G GGG GG G G C G G G
Sbjct: 124 CGG------GGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGG 162
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +3
Query: 666 GAXPPPPPXXXTXXXSXXXXPXXXTXKKXTXXXPPXXTEXPPXXNGXQPAPP 821
G+ PPPPP + + P PP PP G P PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGSPPPPP 284
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/67 (25%), Positives = 19/67 (28%)
Frame = +3
Query: 324 PXTNHPXXHPQXRPNGXPTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKX 503
P P P +G P P P T P PPPA
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 504 PHPPPXK 524
P PPP +
Sbjct: 298 PPPPPPR 304
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +3
Query: 666 GAXPPPPPXXXTXXXSXXXXPXXXTXKKXTXXXPPXXTEXPPXXNGXQPAPP 821
G+ PPPPP + + P PP PP G P PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGSPPPPP 305
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/67 (25%), Positives = 19/67 (28%)
Frame = +3
Query: 324 PXTNHPXXHPQXRPNGXPTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKX 503
P P P +G P P P T P PPPA
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 504 PHPPPXK 524
P PPP +
Sbjct: 319 PPPPPPR 325
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +3
Query: 666 GAXPPPPPXXXTXXXSXXXXPXXXTXKKXTXXXPPXXTEXPPXXNGXQPAPP 821
G+ PPPPP + + P PP PP G P PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP--PPRTGSPPPPPTGSPPPPP 290
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/67 (25%), Positives = 19/67 (28%)
Frame = +3
Query: 324 PXTNHPXXHPQXRPNGXPTPXAPXHXRTRPXTXPXXXXPPXXXXPPPAXXXQRTXXYXKX 503
P P P +G P P P T P PPPA
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 504 PHPPPXK 524
P PPP +
Sbjct: 304 PPPPPPR 310
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/77 (29%), Positives = 23/77 (29%)
Frame = -2
Query: 825 CGGGXVGXRXALGXFLXGXGGXXXXFFXRFXXXVGXXGXXXXXXGTXGGGGXXXXGXXXX 646
CGGG G G G GG G G G GGGG G
Sbjct: 118 CGGGCGGGGGGCGGGCGGGGGGGCGG--------GGGGGCGGGGGGCGGGGGGCGGGGGG 169
Query: 645 LRXGXCXXFWGWGGGXC 595
G G GGG C
Sbjct: 170 CGGGGGGGCGGGGGGGC 186
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/66 (25%), Positives = 19/66 (28%)
Frame = +3
Query: 636 PXXXPXPXXXGAXPPPPPXXXTXXXSXXXXPXXXTXKKXTXXXPPXXTEXPPXXNGXQPA 815
P P P A PPPPP P ++ P P PA
Sbjct: 184 PQEPPKPVEQAA-PPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVEPSDPA 242
Query: 816 PPHXNP 833
PP P
Sbjct: 243 PPSKLP 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,837,940
Number of Sequences: 27780
Number of extensions: 207777
Number of successful extensions: 1347
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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