Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_A17
         (920 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical pr...    54   1e-07
Z81146-1|CAB03521.2|  341|Caenorhabditis elegans Hypothetical pr...    32   0.66 
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical...    29   4.7  
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical...    29   4.7  
U20861-8|AAA62297.3|  372|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AF016671-6|AAK73904.1|  979|Caenorhabditis elegans Adaptin or ad...    29   6.2  
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad...    29   6.2  
U49940-1|AAA93411.2|  435|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AF024492-3|AAF98619.1|  918|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z78542-2|CAB01744.2|  641|Caenorhabditis elegans Hypothetical
           protein F20D1.2 protein.
          Length = 641

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 29/106 (27%), Positives = 48/106 (45%)
 Frame = +2

Query: 350 WLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISDVESIITF 529
           W+  L      N L  +D++++L NQ  LR+D +K    L N+       + ++ES +T 
Sbjct: 43  WMRLLGVSMKPNPLDDWDQLYNLNNQCALRNDCRKLANGLKNKRS-----VPELESFLTL 97

Query: 530 YCKSKNTTYTSNNGWIDIXXXXXXXXXXRSDTYNLFERILKLYTPK 667
           YCK +   Y  + GW+ I           +  +N+F      Y PK
Sbjct: 98  YCKKRGMDYIKDIGWLTILEKILLLNVPAAHEFNVFFAFTTKYIPK 143



 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 699 ILRLILQYHDPELCSFLDTKRITPEQYCSPWLKSLFAGTCSLD 827
           + RL+LQYHDP++ + L++   +P  Y   W  +LF+ + S +
Sbjct: 154 LFRLLLQYHDPQISNHLESLHCSPSMYTKNWFATLFSSSMSTE 196


>Z81146-1|CAB03521.2|  341|Caenorhabditis elegans Hypothetical
           protein K10D11.1 protein.
          Length = 341

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 188 TNLNLSCQT-KQMAGDDDDTWLIELESALLDGCTAQEINALTKGKKIPVSLRPDV 349
           +NLNL CQT KQ A   +  +++ LE++L       + N    G    V LRP +
Sbjct: 200 SNLNLLCQTKKQWASTQNAIFVVNLEASLSKDILLVQANRYLTGIDEMVELRPQL 254


>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23b protein.
          Length = 1156

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/76 (25%), Positives = 33/76 (43%)
 Frame = +2

Query: 353 LLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISDVESIITFY 532
           LL  N + +  QL +F    DL +  +  D ++KF   LG    +K+  + D+E +    
Sbjct: 196 LLAQNVRISDQQLEVFIGTEDLKSIQKEVDQIRKFYIPLGRNLLEKMRYLEDLELVAPLQ 255

Query: 533 CKSKNTTYTSNNGWID 580
               +  Y  N   +D
Sbjct: 256 GNCSSEEYRMNPFQVD 271


>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23a protein.
          Length = 1138

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 19/76 (25%), Positives = 33/76 (43%)
 Frame = +2

Query: 353 LLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISDVESIITFY 532
           LL  N + +  QL +F    DL +  +  D ++KF   LG    +K+  + D+E +    
Sbjct: 196 LLAQNVRISDQQLEVFIGTEDLKSIQKEVDQIRKFYIPLGRNLLEKMRYLEDLELVAPLQ 255

Query: 533 CKSKNTTYTSNNGWID 580
               +  Y  N   +D
Sbjct: 256 GNCSSEEYRMNPFQVD 271


>U20861-8|AAA62297.3|  372|Caenorhabditis elegans Hypothetical
           protein C28H8.9a protein.
          Length = 372

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -1

Query: 602 NLTKVIKYQSNHCLKCKLCSSIC 534
           N+TK+IK     CL+CK C +IC
Sbjct: 296 NVTKIIKRSGWQCLECKSC-TIC 317


>AF016671-6|AAK73904.1|  979|Caenorhabditis elegans Adaptin or
           adaptin-related proteinprotein 5, isoform b protein.
          Length = 979

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/82 (23%), Positives = 36/82 (43%)
 Frame = +2

Query: 329 VSLRPDVWLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISD 508
           V    D+ L CL+ +D   ++   D ++ + ++  + + VKK +E +   E        +
Sbjct: 65  VQAHKDIVLRCLDDKDESIRIRSLDLLYGMVSKKNIVEIVKKLMEHVEAAEGSHYR--DE 122

Query: 509 VESIITFYCKSKNTTYTSNNGW 574
           + S I   C   N  Y +N  W
Sbjct: 123 LLSRIIGICSWSNYQYITNFEW 144


>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
           adaptin-related proteinprotein 5, isoform a protein.
          Length = 1251

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/82 (23%), Positives = 36/82 (43%)
 Frame = +2

Query: 329 VSLRPDVWLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISD 508
           V    D+ L CL+ +D   ++   D ++ + ++  + + VKK +E +   E        +
Sbjct: 337 VQAHKDIVLRCLDDKDESIRIRSLDLLYGMVSKKNIVEIVKKLMEHVEAAEGSHYR--DE 394

Query: 509 VESIITFYCKSKNTTYTSNNGW 574
           + S I   C   N  Y +N  W
Sbjct: 395 LLSRIIGICSWSNYQYITNFEW 416


>U49940-1|AAA93411.2|  435|Caenorhabditis elegans Hypothetical
           protein T24D11.1 protein.
          Length = 435

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 702 LRLILQYHDPELCSFLDTKRITPEQYCSPWLKSLFAGTCSLDVA 833
           L  ++Q   P+L +  +        Y S W  +LF  T  LD+A
Sbjct: 240 LECLVQDQMPDLYTHFNNMGFDTSMYASSWFLTLFTTTMPLDIA 283


>AF024492-3|AAF98619.1|  918|Caenorhabditis elegans Hypothetical
           protein F14F9.4 protein.
          Length = 918

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 236 DDTWLIELESALLDGCTAQEIN--ALTKGKKIPVSLRPDVWLLCLNCQ 373
           D+ WL+        G   Q +   A + GK++  SL P+ +L+C NC+
Sbjct: 688 DEKWLLRYAVKNAQGAGDQTLLQVACSCGKEVYSSLLPEEFLICPNCK 735


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,013,015
Number of Sequences: 27780
Number of extensions: 396673
Number of successful extensions: 1059
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)