Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_A12
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928...    36   0.045
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707...    36   0.045
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710     35   0.10 
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205...    33   0.32 
01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787...    31   0.97 

>09_06_0335 +
           22391378-22391480,22391580-22391769,22392747-22392813,
           22393177-22393206
          Length = 129

 Score = 35.9 bits (79), Expect = 0.045
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +3

Query: 57  ATNCRKTKCGHTNNLRP 107
           A NCRK KCGH+N LRP
Sbjct: 107 AVNCRKKKCGHSNQLRP 123


>03_02_0281 -
           7069847-7069876,7070152-7070218,7071320-7071445,
           7071727-7071916,7072008-7072110
          Length = 171

 Score = 35.9 bits (79), Expect = 0.045
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +3

Query: 57  ATNCRKTKCGHTNNLRP 107
           A NCRK KCGH+N LRP
Sbjct: 149 AVNCRKKKCGHSNQLRP 165


>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
          Length = 143

 Score = 34.7 bits (76), Expect = 0.10
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 42  RXIFXATNCRKTKCGHTNNL 101
           R  + ATNCRK KCGHTN +
Sbjct: 108 RLPYKATNCRKKKCGHTNEV 127


>09_04_0354 +
           16919133-16919235,16920145-16920355,16920478-16920544,
           16920767-16920808
          Length = 140

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 57  ATNCRKTKCGHTNNLR 104
           +TNCRK KCGH+N +R
Sbjct: 114 STNCRKKKCGHSNEIR 129


>01_01_0995 +
           7875273-7875495,7876196-7876274,7876422-7876536,
           7878507-7878761
          Length = 223

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 20/59 (33%), Positives = 23/59 (38%)
 Frame = +2

Query: 497 GXGGGXXXFXGXXXXPTPRXXXXGFWGPXPXPRXXXPCPRXXGWGXGFXXPQGGKYGFP 673
           G GG    F G    P PR    G+  P P P      P   G G  +  P+GG  G P
Sbjct: 23  GGGGEYGTFQGPPSYPPPRPPVVGY--PQPAPP-----PGLYGQGDPYYRPRGGYQGIP 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,915,817
Number of Sequences: 37544
Number of extensions: 200836
Number of successful extensions: 197
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)