Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_A08
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 369 e-102
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 369 e-102
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 194 3e-80
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 254 8e-68
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 194 6e-50
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 194 6e-50
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 180 2e-45
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 87 2e-17
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 86 4e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 86 4e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 85 7e-17
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 85 7e-17
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 85 7e-17
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.013
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.21
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.21
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.21
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.37
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.49
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 2.0
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 3.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 3.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 3.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 3.5
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 6.1
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 28 8.0
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 28 8.0
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 369 bits (908), Expect = e-102
Identities = 181/240 (75%), Positives = 194/240 (80%)
Frame = +1
Query: 190 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLXAERERGITIDIALWKFETSKY 369
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL AERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 549
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 550 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDXMLEPS 729
KQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GD MLE S
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVS 205
Query: 730 TKMPWVQGMAGGA*GRQS*RKMPH*SSRCHLXPXRPXDKPLXFSLQXVYXIXGXGTGPXG 909
+ MPW +G A + K + + P RP D+PL LQ VY I G GT P G
Sbjct: 206 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 265
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 114 MGKEKTHINIVVIGHVDSGKSTTTG 188
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 369 bits (908), Expect = e-102
Identities = 181/240 (75%), Positives = 194/240 (80%)
Frame = +1
Query: 190 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLXAERERGITIDIALWKFETSKY 369
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL AERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 549
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 550 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDXMLEPS 729
KQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GD MLE S
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVS 205
Query: 730 TKMPWVQGMAGGA*GRQS*RKMPH*SSRCHLXPXRPXDKPLXFSLQXVYXIXGXGTGPXG 909
+ MPW +G A + K + + P RP D+PL LQ VY I G GT P G
Sbjct: 206 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 265
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 114 MGKEKTHINIVVIGHVDSGKSTTTG 188
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 194 bits (472), Expect(2) = 3e-80
Identities = 88/92 (95%), Positives = 91/92 (98%)
Frame = +1
Query: 190 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLXAERERGITIDIALWKFETSKY 369
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL AERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 465
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 123 bits (297), Expect(2) = 3e-80
Identities = 64/118 (54%), Positives = 75/118 (63%)
Frame = +1
Query: 556 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDXMLEPSTK 735
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GD MLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 736 MPWVQGMAGGA*GRQS*RKMPH*SSRCHLXPXRPXDKPLXFSLQXVYXIXGXGTGPXG 909
MPW +G A + K + + P RP D+PL LQ VY I G GT P G
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVG 231
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 114 MGKEKTHINIVVIGHVDSGKSTTTG 188
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 254 bits (621), Expect = 8e-68
Identities = 123/147 (83%), Positives = 130/147 (88%)
Frame = +1
Query: 190 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLXAERERGITIDIALWKFETSKY 369
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL AERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 549
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 550 KQLIVGVNKMDSTEPPYSEPRFEEIKK 630
KQL V+ T P S R + I++
Sbjct: 146 KQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 114 MGKEKTHINIVVIGHVDSGKSTTTG 188
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/96 (27%), Positives = 36/96 (37%)
Frame = +2
Query: 620 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGFKGWQVERKEGKADGKCL 799
+S + P +SRR T Q L D TETTC C G + + ++ +
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 800 IEALDAIXHLXAPXTSPXXFPCXTYTKSVVLVPAXS 907
L H A T F T+S L P+ S
Sbjct: 212 SRLLTPSSHHNAQLTDHSVFHSRMCTRSEELEPSQS 247
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 194 bits (474), Expect = 6e-50
Identities = 95/189 (50%), Positives = 132/189 (69%), Gaps = 1/189 (0%)
Frame = +1
Query: 190 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLXAERERGITIDIALWKFETSKY 369
HL++ +D RTI+KF+ EA GK SF YAWVLD+ ERERG+T+DI FETS
Sbjct: 189 HLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHR 248
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 549
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV
Sbjct: 249 RIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGV 308
Query: 550 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDXMLEP 726
QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+ +++
Sbjct: 309 TQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK- 363
Query: 727 STKMPWVQG 753
++ W G
Sbjct: 364 RMELDWYDG 372
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 123 EKTHINIVVIGHVDSGKSTTTG 188
+K IN++V+GHVD+GKST G
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMG 188
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 194 bits (474), Expect = 6e-50
Identities = 95/189 (50%), Positives = 132/189 (69%), Gaps = 1/189 (0%)
Frame = +1
Query: 190 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLXAERERGITIDIALWKFETSKY 369
HL++ +D RTI+KF+ EA GK SF YAWVLD+ ERERG+T+DI FETS
Sbjct: 207 HLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHR 266
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 549
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV
Sbjct: 267 RIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGV 326
Query: 550 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDXMLEP 726
QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+ +++
Sbjct: 327 TQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK- 381
Query: 727 STKMPWVQG 753
++ W G
Sbjct: 382 RMELDWYDG 390
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 123 EKTHINIVVIGHVDSGKSTTTG 188
+K IN++V+GHVD+GKST G
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMG 206
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 180 bits (437), Expect = 2e-45
Identities = 80/173 (46%), Positives = 121/173 (69%), Gaps = 1/173 (0%)
Frame = +1
Query: 193 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLXAERERGITIDIALWKFETSKYY 372
L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T+++ FET K +
Sbjct: 129 LMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRH 188
Query: 373 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 552
TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK
Sbjct: 189 FTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVK 248
Query: 553 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHG 708
L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG G
Sbjct: 249 HLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 117 GKEKTHINIVVIGHVDSGKSTTTG 188
G K HIN+V +GHVD+GKST G
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGG 127
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +1
Query: 190 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 303
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 114 MGKEKTHINIVVIGHVDSGKSTTTG 188
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 85.8 bits (203), Expect = 4e-17
Identities = 51/132 (38%), Positives = 73/132 (55%)
Frame = +1
Query: 292 LDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+DK E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 472 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 651
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 652 KIGYNPAAVAFV 687
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 126 KTHINIVVIGHVDSGKSTTTGS 191
K ++N+ IGH+D GK+T T +
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSA 64
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 85.8 bits (203), Expect = 4e-17
Identities = 51/132 (38%), Positives = 73/132 (55%)
Frame = +1
Query: 292 LDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+DK E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 472 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 651
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 652 KIGYNPAAVAFV 687
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 126 KTHINIVVIGHVDSGKSTTTGS 191
K ++N+ IGH+D GK+T T +
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSA 64
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 85.0 bits (201), Expect = 7e-17
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Frame = +1
Query: 292 LDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 472 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 645
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 646 IKKIGYNPAAVAFVPISGWHGDXMLEPSTKMPWVQGMAGGA*GRQS*RKMPH*SSRCHLX 825
+ + GY P P+ G + K P + G ++ +++ +
Sbjct: 197 LNEFGY-PGDTC--PVI--FGSALCALEGKQPEI--------GEEAVKQLLEVLDNKFVI 243
Query: 826 PXRPXDKPLXFSLQXVYXIXGXGT 897
P R ++ F+ + VY I G GT
Sbjct: 244 PERKVNEEPMFAAEHVYSIVGRGT 267
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 120 KEKTHINIVVIGHVDSGKSTTTGS 191
++K H+N+ IGHVD GK+T T +
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSA 68
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 85.0 bits (201), Expect = 7e-17
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Frame = +1
Query: 292 LDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 472 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 645
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 646 IKKIGYNPAAVAFVPISGWHGDXMLEPSTKMPWVQGMAGGA*GRQS*RKMPH*SSRCHLX 825
+ + GY P P+ G + K P + G ++ +++ +
Sbjct: 198 LNEFGY-PGDTC--PVI--FGSALCALEGKQPEI--------GEEAVKQLLEVLDNKFVI 244
Query: 826 PXRPXDKPLXFSLQXVYXIXGXGT 897
P R ++ F+ + VY I G GT
Sbjct: 245 PERKVNEEPMFAAEHVYSIVGRGT 268
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 120 KEKTHINIVVIGHVDSGKSTTTGS 191
++K H+N+ IGHVD GK+T T +
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSA 69
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 85.0 bits (201), Expect = 7e-17
Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 2/204 (0%)
Frame = +1
Query: 292 LDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 472 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 645
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 646 IKKIGYNPAAVAFVPISGWHGDXMLEPSTKMPWVQGMAGGA*GRQS*RKMPH*SSRCHLX 825
+ + GY P P+ G + K P + G ++ +++ +
Sbjct: 198 LNEFGY-PGDTC--PVI--FGSALCALEGKQPEI--------GEEAVKQLLEVLDNKFVI 244
Query: 826 PXRPXDKPLXFSLQXVYXIXGXGT 897
P R ++ F+ + VY I G GT
Sbjct: 245 PERKVNEEPMFAAEHVYSIVGRGT 268
Score = 33.5 bits (73), Expect = 0.21
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 120 KEKTHINIVVIGHVDSGKSTTTGS 191
++K H+N+ IGHVD GK+T T +
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSA 69
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 52.4 bits (120), Expect = 4e-07
Identities = 35/98 (35%), Positives = 48/98 (48%)
Frame = +1
Query: 289 VLDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 468
+LDKL ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 469 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 582
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect = 2e-04
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 262 GKGSFKYAWVLDKLXAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 438
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 439 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 582
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 373 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 552
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 553 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--NPAAVAFVPISGWHGDXMLE 723
++I+ +NK D E + + E K+V +K +G N V G+ + ML+
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQ 181
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 135 INIVVIGHVDSGKSTTT 185
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/97 (32%), Positives = 43/97 (44%)
Frame = +1
Query: 292 LDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 471
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 472 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 582
G G+ T L + + I VNKMD
Sbjct: 146 VG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 289 VLDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 468
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 469 GTG 477
G
Sbjct: 124 SAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 370 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 549
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 550 KQLIVGVNKMDSTEPPYSEPRFEEI 624
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 295 DKLXAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 459
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 460 VAAGTG 477
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 295 DKLXAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 459
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 460 VAAGTG 477
V A G
Sbjct: 107 VDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 575 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 447
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 292 LDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 462
+D E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 32.7 bits (71), Expect = 0.37
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 292 LDKLXAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 462
+D E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.49
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 379 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 558
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 559 IVGVNKMDSTEPPYSEPR 612
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 328 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 477
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 114 MGKEKTHINIVVIGHVDSGKSTTTGS 191
M +++ N+ VI HVD GKST T S
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDS 38
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 328 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 477
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 114 MGKEKTHINIVVIGHVDSGKSTTTGS 191
M +++ N+ VI HVD GKST T S
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDS 38
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 638 PHTSRRLATTQLLSLSCPFLD 700
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 638 PHTSRRLATTQLLSLSCPFLD 700
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 638 PHTSRRLATTQLLSLSCPFLD 700
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 638 PHTSRRLATTQLLSLSCPFLD 700
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 135 INIVVIGHVDSGKSTTT 185
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.1
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 558 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 400
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 399 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 280
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 28.3 bits (60), Expect = 8.0
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +1
Query: 403 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 570
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 571 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 705
D EP P EP +EEI + Y + + P + PI H
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVH 558
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 28.3 bits (60), Expect = 8.0
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +1
Query: 403 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 570
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 571 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH 705
D EP P EP +EEI + Y + + P + PI H
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVH 583
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,821,914
Number of Sequences: 27780
Number of extensions: 417000
Number of successful extensions: 1179
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -