Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_A06
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129025-1|AAM98768.1|  307|Homo sapiens unknown protein.              32   2.4  
AL121758-2|CAC00548.3|  307|Homo sapiens scratch homolog 2, zinc...    32   2.4  
BC043351-1|AAH43351.1|  568|Homo sapiens JRK protein protein.          32   3.2  
AK127631-1|BAC87064.1|  556|Homo sapiens protein ( Homo sapiens ...    32   3.2  
AF072468-1|AAC32353.1|  416|Homo sapiens unknown protein.              32   3.2  
AF072467-1|AAC32352.1|  470|Homo sapiens unknown protein.              32   3.2  
AB209002-1|BAD92239.1|  412|Homo sapiens jerky homolog variant p...    32   3.2  
BC036197-1|AAH36197.1|  196|Homo sapiens MGC39545 protein protein.     31   7.5  

>AY129025-1|AAM98768.1|  307|Homo sapiens unknown protein.
          Length = 307

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 27/90 (30%), Positives = 36/90 (40%)
 Frame = -3

Query: 330 PLKNGGGAGGXAPQELRDMKQNVACALAPSNHRLKLAVHVPSEPSEMNDPLSSHSEKRDR 151
           P  + G A    P    D  Q     LAP+        + P+ P E +DP S  S    R
Sbjct: 40  PPGDNGYAPHRLPPSSYDADQKPGLELAPAE-----PAYPPAAPEEYSDPESPQSSLSAR 94

Query: 150 QKRGKSVSKTCHGLDDLHAPTSCGRSARRR 61
             RG++     + +D      S GRS RRR
Sbjct: 95  YFRGEAAVTDSYSMDAFF--ISDGRSRRRR 122


>AL121758-2|CAC00548.3|  307|Homo sapiens scratch homolog 2, zinc
           finger protein (Drosophila) protein.
          Length = 307

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 27/90 (30%), Positives = 36/90 (40%)
 Frame = -3

Query: 330 PLKNGGGAGGXAPQELRDMKQNVACALAPSNHRLKLAVHVPSEPSEMNDPLSSHSEKRDR 151
           P  + G A    P    D  Q     LAP+        + P+ P E +DP S  S    R
Sbjct: 40  PPGDNGYAPHRLPPSSYDADQKPGLELAPAE-----PAYPPAAPEEYSDPESPQSSLSAR 94

Query: 150 QKRGKSVSKTCHGLDDLHAPTSCGRSARRR 61
             RG++     + +D      S GRS RRR
Sbjct: 95  YFRGEAAVTDSYSMDAFF--ISDGRSRRRR 122


>BC043351-1|AAH43351.1|  568|Homo sapiens JRK protein protein.
          Length = 568

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 363 ADESGARARTLPLKNGGGAGGXAPQELRDMKQNVACALAPSNHRLK-LAVHVPSEP 199
           ADE+G   R LP     G     P++ +D    + CA A  +HRLK LA+   S P
Sbjct: 186 ADETGLFWRCLPNPTPEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGP 241


>AK127631-1|BAC87064.1|  556|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45729 fis, clone HHDPC2008185, moderately
           similar to Mus musculus jerky (Jrk). ).
          Length = 556

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 363 ADESGARARTLPLKNGGGAGGXAPQELRDMKQNVACALAPSNHRLK-LAVHVPSEP 199
           ADE+G   R LP     G     P++ +D    + CA A  +HRLK LA+   S P
Sbjct: 186 ADETGLFWRCLPNPTPEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGP 241


>AF072468-1|AAC32353.1|  416|Homo sapiens unknown protein.
          Length = 416

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 363 ADESGARARTLPLKNGGGAGGXAPQELRDMKQNVACALAPSNHRLK-LAVHVPSEP 199
           ADE+G   R LP     G     P++ +D    + CA A  +HRLK LA+   S P
Sbjct: 46  ADETGLFWRCLPNPTPEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGP 101


>AF072467-1|AAC32352.1|  470|Homo sapiens unknown protein.
          Length = 470

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 363 ADESGARARTLPLKNGGGAGGXAPQELRDMKQNVACALAPSNHRLK-LAVHVPSEP 199
           ADE+G   R LP     G     P++ +D    + CA A  +HRLK LA+   S P
Sbjct: 88  ADETGLFWRCLPNPTPEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGP 143


>AB209002-1|BAD92239.1|  412|Homo sapiens jerky homolog variant
           protein.
          Length = 412

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 363 ADESGARARTLPLKNGGGAGGXAPQELRDMKQNVACALAPSNHRLK-LAVHVPSEP 199
           ADE+G   R LP     G     P++ +D    + CA A  +HRLK LA+   S P
Sbjct: 30  ADETGLFWRCLPNPTPEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIGKCSGP 85


>BC036197-1|AAH36197.1|  196|Homo sapiens MGC39545 protein protein.
          Length = 196

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +3

Query: 585 AHNQTAKYYTFSVPPHHPLSEPRSCCPTVAPPASHATVSDPECVGLR 725
           AH   A+  T + PP   L  P  C  T+APPAS A  S  +  G+R
Sbjct: 36  AHPTAARPAT-AQPPRSLL--PPVCSKTIAPPASAAAASGSDTAGMR 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,300,384
Number of Sequences: 237096
Number of extensions: 2015397
Number of successful extensions: 6838
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6829
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)