Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_A05
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0310 + 16578679-16580936,16581027-16581294                       29   3.9  
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157...    29   3.9  
06_01_0127 - 977667-978719,978875-979051                               29   5.1  
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906...    29   6.8  
12_02_0454 + 19199063-19200757,19202201-19202287                       28   9.0  
07_01_0230 - 1679165-1681108                                           28   9.0  
01_05_0251 + 19952882-19955459,19956209-19956245,19956370-199565...    28   9.0  
01_03_0207 - 13790801-13792057                                         28   9.0  

>09_04_0310 + 16578679-16580936,16581027-16581294
          Length = 841

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +2

Query: 617 VLHKCTCVYSGWN--VDNRDNYYPITEILDRNPRTDSKEICVALDLNDLIKVRDK 775
           VL KC  +++  N  V N   YY + E+L+ +    S+E+  A DL+DL+   DK
Sbjct: 651 VLRKCQVLFNEMNHFVTNFQ-YYIMFEVLEVSWARFSEEMDSAKDLDDLLLAHDK 704


>04_04_0411 -
           25014511-25015015,25015098-25015169,25015700-25015734,
           25015805-25015873,25015993-25016044,25016444-25016526,
           25016625-25016726,25017150-25017884,25017962-25018012,
           25018792-25018983,25019066-25019216,25020012-25020193,
           25020329-25020532,25020752-25020859
          Length = 846

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +2

Query: 182 EPEEFQDSGEDWTPDADSNEPASRTGR 262
           E  EF D G D  PDA S+ P  R GR
Sbjct: 636 EKWEFIDEGRDNNPDASSDMPHGRRGR 662


>06_01_0127 - 977667-978719,978875-979051
          Length = 409

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 457 CTKAFPFRKFCLAEIRCKMGWRYCN 531
           C +  P+R+ CLA  +C+ G  Y N
Sbjct: 130 CARLGPYRRGCLANSQCQFGITYAN 154


>02_03_0313 -
           17590109-17590148,17590254-17590382,17590479-17590612,
           17590779-17590841,17590920-17591070,17593372-17593424,
           17593483-17593629,17593839-17594163,17594240-17594409,
           17595252-17595453,17596065-17596273,17597051-17597260,
           17597360-17597489,17599664-17600402,17600411-17600531
          Length = 940

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 572 KALLQKFIPMESNGRVLHKCTCVYSGWNVDNRDNY 676
           K + Q + P E+  R LH C C    +  D  D +
Sbjct: 293 KGMRQMYEPFENLARELHMCPCCQRAFTPDEEDEF 327


>12_02_0454 + 19199063-19200757,19202201-19202287
          Length = 593

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
 Frame = +2

Query: 164 GQGRAAE--PEEF-----QDSGEDWTPDADSNEPASRTGRKRVSKAPVNNTKKKRK 310
           GQGR +E  PEE      ++  +D      SNE ++   ++   K    NTKK +K
Sbjct: 488 GQGRKSENQPEESRHNNDENGADDKMEGPSSNEDSAAASKEDQQKGKTGNTKKNKK 543


>07_01_0230 - 1679165-1681108
          Length = 647

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 287 SPVPLIHVFCQYEMQVRSNRRPASN-LHQSPEILL 186
           SP+  ++ F  + ++V   RRP +N  H SP IL+
Sbjct: 506 SPLTDVYAFAIFVLEVTCGRRPINNYTHDSPTILV 540


>01_05_0251 +
           19952882-19955459,19956209-19956245,19956370-19956586,
           19957063-19957221,19957397-19957516,19957609-19957719
          Length = 1073

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 718 VCAWIAIQYFGYGVIIVTVVN 656
           +C W  + +  YGV++V  VN
Sbjct: 901 ICLWYGLPFVSYGVVLVATVN 921


>01_03_0207 - 13790801-13792057
          Length = 418

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 320 MMSFYVSFWCCSPVPLIHVFCQYEMQVRSNRRPAS-NLHQSPEILLVQL 177
           ++ FYV  +C   +PLI V  +Y   +  NRR AS ++   P +LLV L
Sbjct: 362 VIMFYVLIYCVCFLPLIGV--EYRPGMSVNRRKASISIQLRPIMLLVLL 408


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,438,507
Number of Sequences: 37544
Number of extensions: 430008
Number of successful extensions: 1256
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)