Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_A04
(935 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein. 133 1e-30
CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein. 133 1e-30
CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein. 133 1e-30
BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein. 133 1e-30
AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase (ubi... 133 1e-30
AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone oxidore... 133 1e-30
BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5 ... 40 0.013
BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5 ... 40 0.013
BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2 ... 33 1.5
BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2 ... 33 1.5
>CR541997-1|CAG46794.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 133 bits (321), Expect = 1e-30
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +1
Query: 115 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 294
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 295 FIKNKXVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 474
F+KN VTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 475 E 477
+
Sbjct: 127 D 127
>CR456714-1|CAG32995.1| 128|Homo sapiens NDUFA6 protein.
Length = 128
Score = 133 bits (321), Expect = 1e-30
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +1
Query: 115 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 294
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 295 FIKNKXVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 474
F+KN VTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 475 E 477
+
Sbjct: 127 D 127
>CR456529-1|CAG30415.1| 154|Homo sapiens NDUFA6 protein.
Length = 154
Score = 133 bits (321), Expect = 1e-30
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +1
Query: 115 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 294
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 33 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 92
Query: 295 FIKNKXVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 474
F+KN VTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 93 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 152
Query: 475 E 477
+
Sbjct: 153 D 153
>BC002772-1|AAH02772.1| 128|Homo sapiens NDUFA6 protein protein.
Length = 128
Score = 133 bits (321), Expect = 1e-30
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +1
Query: 115 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 294
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 295 FIKNKXVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 474
F+KN VTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 475 E 477
+
Sbjct: 127 D 127
>AL021878-2|CAI19953.1| 154|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 6, 14kDa protein.
Length = 154
Score = 133 bits (321), Expect = 1e-30
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +1
Query: 115 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 294
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 33 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 92
Query: 295 FIKNKXVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 474
F+KN VTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 93 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 152
Query: 475 E 477
+
Sbjct: 153 D 153
>AF047182-1|AAC04267.1| 128|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B14 protein.
Length = 128
Score = 133 bits (321), Expect = 1e-30
Identities = 56/121 (46%), Positives = 86/121 (71%)
Frame = +1
Query: 115 RQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKEL 294
RQA + VKP+ S EA+ RV LY+AWYR++P V + + + R+K++E+
Sbjct: 7 RQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREM 66
Query: 295 FIKNKXVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAYFKPTEEPKPKNFLSKFFSGN 474
F+KN VTD RV+D+LVIKG++EL+E++ +WKQ+ H+M +F TE P+PK+FLSKF+ G+
Sbjct: 67 FMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGH 126
Query: 475 E 477
+
Sbjct: 127 D 127
>BC100276-1|AAI00277.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 39.9 bits (89), Expect = 0.013
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 181 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKXVTDIRVIDMLVIKGQM 360
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 361 ELKE 372
+KE
Sbjct: 60 VMKE 63
>BC071769-1|AAH71769.1| 88|Homo sapiens LYR motif containing 5
protein.
Length = 88
Score = 39.9 bits (89), Expect = 0.013
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +1
Query: 181 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKXVTDIRVIDMLVIKGQM 360
R VL LYK + Y+ +DY PK +++LK +F+KNK V + I L+ +G+
Sbjct: 6 RGEVLKLYK----NLLYLGRDY--PKGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEF 59
Query: 361 ELKE 372
+KE
Sbjct: 60 VMKE 63
>BC104668-1|AAI04669.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 33.1 bits (72), Expect = 1.5
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 181 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKXVTDIRVIDMLVIKGQM 360
R +VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 361 ELKE 372
+LKE
Sbjct: 75 QLKE 78
>BC009782-1|AAH09782.1| 88|Homo sapiens LYR motif containing 2
protein.
Length = 88
Score = 33.1 bits (72), Expect = 1.5
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 181 RNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIKNKXVTDIRVIDMLVIKGQM 360
R +VL LY+ + I + D D ++ +E F +NK T+ I M++ +G M
Sbjct: 19 RQQVLLLYRRILQTIRQVPNDSD----RKYLKDWAREEFRRNKSATEEDTIRMMITQGNM 74
Query: 361 ELKE 372
+LKE
Sbjct: 75 QLKE 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,028,094
Number of Sequences: 237096
Number of extensions: 2128697
Number of successful extensions: 5331
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5319
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -