Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_A04
         (935 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-56|CAB16513.1|  131|Caenorhabditis elegans Hypothetical p...    71   2e-12
U10402-9|AAA19065.1|  892|Caenorhabditis elegans Gro-1 operon ge...    32   0.51 
AY052769-1|AAL14108.1|  885|Caenorhabditis elegans GOP-1 protein.      32   0.51 
AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical...    30   2.1  
AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein p...    30   2.1  
Z82076-2|CAB04938.1|  360|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AF125461-3|AAK18996.2|  282|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z99281-56|CAB16513.1|  131|Caenorhabditis elegans Hypothetical
           protein Y57G11C.12b protein.
          Length = 131

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = +1

Query: 139 KTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQC-REKLKELFIKNKXV 315
           +TV P+ S++ AEAR  VL+ YK + R  P    D+ +        R  +K+ F KN  +
Sbjct: 17  RTVAPIKSNNSAEARMSVLAAYKEFQRLTPKFWWDFGLHDMPLGVFRAVIKKQFTKNGHL 76

Query: 316 TDIRVIDMLVIKGQMELKESVNIWKQKGHIMAY-FKPTEEPKPKNFLSKFFSGNE 477
           TD+RV+D LV +    +K     +    H+  Y F    E KPK+FLSKF +G E
Sbjct: 77  TDVRVVDRLVGETHQHMKSIRYAFYNPDHVRNYLFAENVEAKPKDFLSKFLNGKE 131


>U10402-9|AAA19065.1|  892|Caenorhabditis elegans Gro-1 operon gene
           protein 1 protein.
          Length = 892

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 396 LLFPYVHRLFQLHLTLNNQHINDSNISHXFVL-NEE----FFQFLSTLCF*LGNVIILHY 232
           +LF  +     L+  L+N H+N S ISH F L N+E    +  FL TL F L    I  +
Sbjct: 99  ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 157

Query: 231 IGDLT 217
             + T
Sbjct: 158 FNETT 162


>AY052769-1|AAL14108.1|  885|Caenorhabditis elegans GOP-1 protein.
          Length = 885

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 396 LLFPYVHRLFQLHLTLNNQHINDSNISHXFVL-NEE----FFQFLSTLCF*LGNVIILHY 232
           +LF  +     L+  L+N H+N S ISH F L N+E    +  FL TL F L    I  +
Sbjct: 92  ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 150

Query: 231 IGDLT 217
             + T
Sbjct: 151 FNETT 155


>AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical
           protein Y116A8C.32 protein.
          Length = 699

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 907 PXPGGXGGFLXXKNPPTPSP 848
           P PGG GGF+    PP P P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683


>AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein
           protein.
          Length = 699

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 907 PXPGGXGGFLXXKNPPTPSP 848
           P PGG GGF+    PP P P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683


>Z82076-2|CAB04938.1|  360|Caenorhabditis elegans Hypothetical
           protein W07G1.6 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = -3

Query: 444 FWFRFFCWFEVGHNVPLLFPYVHRLFQLHLTLNNQHINDSNI-SHXFVLNEEFFQFLSTL 268
           F F F  WFE    + L++PY + L    + + + H+  +N  +    +     ++  T 
Sbjct: 67  FSFYFGAWFECWLGLVLVWPYKNGL----VLVEDTHMKFTNFETSDRTIMAHITKYPETT 122

Query: 267 CF*LGNVIILHYI 229
           C   G+ +I HY+
Sbjct: 123 CLLFGSFLIWHYL 135


>AF125461-3|AAK18996.2|  282|Caenorhabditis elegans Hypothetical
           protein Y8A9A.5 protein.
          Length = 282

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +2

Query: 428 KNLNQKISFRNSSLEMNDLFIYFVQSLKLLNLSNEYINVNL 550
           +NLNQ + +   S+ ++DLF+    ++K+ +   +Y ++NL
Sbjct: 179 QNLNQLVIWTERSVSLDDLFLNNALAVKINSAQFDYKDLNL 219


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,796,874
Number of Sequences: 27780
Number of extensions: 309794
Number of successful extensions: 751
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)