Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_A02
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 77 1e-14
AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical... 48 7e-06
AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical... 48 7e-06
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 35 0.070
U23529-5|AAL32212.2| 385|Caenorhabditis elegans Hypothetical pr... 32 0.49
U23514-7|AAC46539.3| 493|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 31 1.1
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 31 1.5
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 31 1.5
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 31 1.5
AL110498-6|CAL69744.1| 109|Caenorhabditis elegans Hypothetical ... 30 2.0
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.5
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.5
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 3.5
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 3.5
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 29 3.5
U64858-10|AAB18287.1| 138|Caenorhabditis elegans Hypothetical p... 29 4.6
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 29 4.6
Z77667-3|CAB01237.1| 527|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical pr... 29 6.0
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear recep... 29 6.0
AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein. 29 6.0
AC006671-3|AAR30203.1| 235|Caenorhabditis elegans Nuclear hormo... 29 6.0
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 29 6.0
AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormo... 29 6.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 8.0
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 8.0
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 77.4 bits (182), Expect = 1e-14
Identities = 58/174 (33%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Frame = +3
Query: 312 LAQSSIRLLKELEARGRPTGWKQCGSLLLARTRDRMTVYRRMKSQSVSWSIDCDLVT-PK 488
+AQ+S+ L L + + +CG LA + + RRM S+ V + +L+
Sbjct: 82 IAQASLDLYSHLATTCK-FRYIKCGRTYLASSMANEILLRRMYSRGVVHNDKVELLDCQS 140
Query: 489 KCHELFPMLNVEDVLGGLWIPGDGVGDPHLLCMSLMREATDKGVGVMEDCSVTAVLSKDD 668
+ E +P L EDV L+ P D DP LC L A D G + E V V D+
Sbjct: 141 EMLERWPFLQTEDVQLALFSPEDVALDPVALCQHLALIAKDYGALIYESNPVLEVHIGDE 200
Query: 669 K-VSGVETTNGAIECDYFINCAGFWAXQ--VGQLARPQVKVPLLPCEHYYLHTS 821
K V GV T G IE +F++ AG WA V L V+ PC + Y+HTS
Sbjct: 201 KQVYGVSTKMGFIETSHFVDAAGIWAGSHLVKALPHQHVQTAAYPCTYSYIHTS 254
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +2
Query: 128 SKAKVVICGGGVMGAAVAYHLANRGWGDRTVVVEKEKVG-AGSRWHSSGL 274
+ A VV+CGGG+ G ++AYHLA R G + +VEK+ +G +G+ S+GL
Sbjct: 20 ANADVVVCGGGISGTSIAYHLAKR--GKKVALVEKDSIGCSGATGLSAGL 67
>AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical
protein Y37E3.17a protein.
Length = 830
Score = 48.4 bits (110), Expect = 7e-06
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Frame = +3
Query: 285 FKPTLAQVRLAQSSIRLLKELEAR-GRPTGWKQCGSLLLARTRDRMTVYRRMKSQSVSWS 461
+KP LA SI L +LEA G ++ G++ LA R+ +R+ ++
Sbjct: 86 YKPILAH------SIELYSKLEAETGVNIDFQPTGTIRLATNETRLAEFRKYVNRDYYKE 139
Query: 462 ID-CD--LVTPKKCHELFPMLNVEDVLGGLWIPGDGVGDPHLLCMSLMREATDKGVGVME 632
D C L+TP + EL P ++ +LG L DG L +L+ A + G V++
Sbjct: 140 GDVCKTTLLTPDQVRELAPDVDHSKILGALHTTNDGTISARALTQALVVGAKNGGAQVID 199
Query: 633 DCSVTAVLSKDDKVSG---VETTNGA-IECDYFINCAGFWAXQVGQLARPQVKVPLLPCE 800
+ K DK G + +G + IN G WA + +L+ +P++ E
Sbjct: 200 GAIPKEI--KYDKEKGHWIIALEDGTLVTTRNLINAGGIWANDIARLSGH--ALPVVVVE 255
Query: 801 HYYLHTSP 824
H Y +P
Sbjct: 256 HQYAVLTP 263
Score = 32.7 bits (71), Expect = 0.37
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 146 ICGGGVMGAAVAYHLANRGWGDRTVVVEKEKVG--AGSRWHSSGL 274
+ G GV G++VAYHL R D ++ V +G+ +HS GL
Sbjct: 32 VLGSGVAGSSVAYHLTKRNIKDVLLLERASGVASPSGTSFHSPGL 76
>AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical
protein Y37E3.17b protein.
Length = 837
Score = 48.4 bits (110), Expect = 7e-06
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Frame = +3
Query: 285 FKPTLAQVRLAQSSIRLLKELEAR-GRPTGWKQCGSLLLARTRDRMTVYRRMKSQSVSWS 461
+KP LA SI L +LEA G ++ G++ LA R+ +R+ ++
Sbjct: 93 YKPILAH------SIELYSKLEAETGVNIDFQPTGTIRLATNETRLAEFRKYVNRDYYKE 146
Query: 462 ID-CD--LVTPKKCHELFPMLNVEDVLGGLWIPGDGVGDPHLLCMSLMREATDKGVGVME 632
D C L+TP + EL P ++ +LG L DG L +L+ A + G V++
Sbjct: 147 GDVCKTTLLTPDQVRELAPDVDHSKILGALHTTNDGTISARALTQALVVGAKNGGAQVID 206
Query: 633 DCSVTAVLSKDDKVSG---VETTNGA-IECDYFINCAGFWAXQVGQLARPQVKVPLLPCE 800
+ K DK G + +G + IN G WA + +L+ +P++ E
Sbjct: 207 GAIPKEI--KYDKEKGHWIIALEDGTLVTTRNLINAGGIWANDIARLSGH--ALPVVVVE 262
Query: 801 HYYLHTSP 824
H Y +P
Sbjct: 263 HQYAVLTP 270
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 35.1 bits (77), Expect = 0.070
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -1
Query: 754 PTCXAQKPAQLIK*SHSIAPFVVSTPDTLSSFDSTAVTEQSSITPTPLSVASLIRDIQSK 575
PT P+ ++ + VV+ P T+ + STAVT+ S++ P +V ++ + +K
Sbjct: 293 PTTVVTIPSTVVTSPITTPSTVVTVPSTVVTVPSTAVTKPSTVVTAPSTVVTVPSTVVTK 352
Query: 574 CGS-PTPSPGIHRPPSTSST 518
+ T SP + P+T T
Sbjct: 353 PNTVVTSSPTVATTPTTVVT 372
>U23529-5|AAL32212.2| 385|Caenorhabditis elegans Hypothetical
protein C15B12.8 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.49
Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 1/165 (0%)
Frame = +3
Query: 306 VRLAQSSIRLLKELEARGRPTGWKQCGSLLLARTRDRMTVYRRMKSQSVSWSIDCDLVTP 485
V L S ++ELE + W + G L A ++ +K + ID +++
Sbjct: 63 VPLVGDSYLQIEELEKKRGEKLWNKLGLLWAATGNQVDSISGHLKKHN----IDHEVLPG 118
Query: 486 KKCHELFPMLNVEDVLGGLWIPGDGVGDPHLLCMSLMREATDKGVGVMEDCSVTAVLSKD 665
K E +P +D L P GV + + E G + ++ V + D
Sbjct: 119 TKITERYPQFKFDDKWTALIDPMGGVIYANKWLKAFQEEFITLGGTIQDNEPVISYGETD 178
Query: 666 DKVSGVETTNGAIECDYFINCAGFWAXQVGQLARPQVK-VPLLPC 797
+ + V+T+ G + + I G W + Q+K + L C
Sbjct: 179 NVIVNVKTSTGEYKTNKIIFTVGCWITKFFPNVNFQIKPISLAVC 223
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 140 VVICGGGVMGAAVAYHLANRGWGDRTVVVEKEKVG 244
V++ G G+ G+ AYH G RT+++E+ +G
Sbjct: 8 VIVVGAGIFGSCTAYHCQRLGL--RTLLLEQYSLG 40
>U23514-7|AAC46539.3| 493|Caenorhabditis elegans Hypothetical
protein F48E8.3 protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 116 SVLPSKAKVVICGGGVMGAAVAYHLANRGWGDRTVVVEKE-KVGAGSRWHSSGL 274
SVL ++ VV+ GGG+ G + + + N G R ++VE E G S SSG+
Sbjct: 3 SVLHAEPTVVVVGGGLAGLSASLDIIN--GGGRVILVEGEGNTGGNSAKASSGI 54
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1
Query: 568 SPTPSPGIHRPPSTSSTFSIGNNS*HFFGV 479
+P PS I PP+TS+ + GNNS ++ GV
Sbjct: 52 APMPSQKILPPPTTSAPSNSGNNSINYMGV 81
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1
Query: 568 SPTPSPGIHRPPSTSSTFSIGNNS*HFFGV 479
+P PS I PP+TS+ + GNNS ++ GV
Sbjct: 113 APMPSQKILPPPTTSAPSNSGNNSINYMGV 142
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1
Query: 568 SPTPSPGIHRPPSTSSTFSIGNNS*HFFGV 479
+P PS I PP+TS+ + GNNS ++ GV
Sbjct: 77 APMPSQKILPPPTTSAPSNSGNNSINYMGV 106
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -1
Query: 697 PFVVSTPDTLSSFDS--TAVTEQSSITPTPLSVASLIRDIQSKCGSPTPSPGIHRPPSTS 524
P + P T FD T + E+ + + +P AS RD+ +PTP+ I+RP S+
Sbjct: 554 PDELGLPTTSIQFDDRLTVIVEEDTPSDSPAPDASP-RDLPE---TPTPTSPIYRPLSSL 609
Query: 523 STFS 512
S+FS
Sbjct: 610 SSFS 613
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -1
Query: 697 PFVVSTPDTLSSFDS--TAVTEQSSITPTPLSVASLIRDIQSKCGSPTPSPGIHRPPSTS 524
P + P T FD T + E+ + + +P AS RD+ +PTP+ I+RP S+
Sbjct: 554 PDELGLPTTSIQFDDRLTVIVEEDTPSDSPAPDASP-RDLPE---TPTPTSPIYRPLSSL 609
Query: 523 STFS 512
S+FS
Sbjct: 610 SSFS 613
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Frame = -1
Query: 793 GSKGTFTCGRANCPTCXAQKPAQLIK*SHSIAPFVVSTPDTLSSFDSTAVTEQSSITPT- 617
G +G F C R C + Q + + SI +S P T+ S + T S+ITPT
Sbjct: 126 GQRGRFFC-RNKCDSGLEQDGSATSTSTTSITTSTLSPPSTVQSTTTAKPTTTSTITPTT 184
Query: 616 ---PLSVASLIRDIQSKCGSPTPSPGIHRPPSTSSTFSIGNNS 497
P S + S S P ST ++ ++ +S
Sbjct: 185 SADPTSTITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESS 227
>AL110498-6|CAL69744.1| 109|Caenorhabditis elegans Hypothetical
protein Y64G10A.11 protein.
Length = 109
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 563 RRPAFALYVSYERSN**RCGCDGRLFCDSCAIERRQSVWSGNYKWCNR 706
+ P Y Y RS + GC+G+ SCA+ + ++++ YK NR
Sbjct: 19 KEPCVQAYTKYVRSR--KPGCNGKF--QSCAVRQPKTIYFHTYKKVNR 62
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -1
Query: 682 TPDTLSSFDSTAVTEQSSITPTPLSVASLIRDIQSKCGSPTPSPGIHRPPSTSSTFSIGN 503
TP + DS + S+ P+ ++ I K TPSP + + PS+SS+ S +
Sbjct: 333 TPKRPQTNDSVSTRRSSTTWEVPIRPTTMNSQISRK---RTPSPVVRKAPSSSSSNSTSS 389
Query: 502 NS 497
+S
Sbjct: 390 SS 391
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = -1
Query: 673 TLSSFDSTAVTEQSSI----TPTPLSVASLIRDIQSKCGSPTPSPGIHRPPSTSSTFSIG 506
T ++ STAVT SS+ +P P S+++ I S S +PS P S+ +I
Sbjct: 221 TAATSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQ 280
Query: 505 NNS*HF-FGVTKSQSMLHDT 449
++S F V S S + T
Sbjct: 281 SSSGTFPSSVASSPSTVGST 300
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = -1
Query: 673 TLSSFDSTAVTEQSSI----TPTPLSVASLIRDIQSKCGSPTPSPGIHRPPSTSSTFSIG 506
T ++ STAVT SS+ +P P S+++ I S S +PS P S+ +I
Sbjct: 221 TAATSPSTAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQ 280
Query: 505 NNS*HF-FGVTKSQSMLHDT 449
++S F V S S + T
Sbjct: 281 SSSGTFPSSVASSPSTVGST 300
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = -1
Query: 691 VVSTPDTLSSFDSTAVTEQSSITP---TPLSVASLIRDIQSKCGSPTPSPGIHRPPSTSS 521
V + P T ++ ST+ ++ TP T + + + S SPT SP P+T++
Sbjct: 279 VTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTA 338
Query: 520 TF---SIGNNS*HFFGVTKSQSMLHDT 449
T ++ N S G+ ++L++T
Sbjct: 339 TVLAPTLKNLSDSGVGINNVSTVLNET 365
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = -1
Query: 691 VVSTPDTLSSFDSTAVTEQSSITP---TPLSVASLIRDIQSKCGSPTPSPGIHRPPSTSS 521
V + P T ++ ST+ ++ TP T + + + S SPT SP P+T++
Sbjct: 261 VTTVPTTTATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTA 320
Query: 520 TF---SIGNNS*HFFGVTKSQSMLHDT 449
T ++ N S G+ ++L++T
Sbjct: 321 TVLAPTLKNLSDSGVGINNVSTVLNET 347
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -1
Query: 691 VVSTPDTLSSFDSTAVTEQSSIT-PTPLSVASLIRDIQSKCGSPTPSPGIHRPPSTSSTF 515
V P + + A EQ+ + P P VA+ D++ CGS P+P P +T S +
Sbjct: 230 VTPAPAAAAPAPADAPVEQAPVAVPAPAPVAA--PDVE--CGSAAPAPAAAAPAATDSGY 285
Query: 514 SIGNNS 497
NS
Sbjct: 286 RSKRNS 291
>U64858-10|AAB18287.1| 138|Caenorhabditis elegans Hypothetical
protein C16D9.8 protein.
Length = 138
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 211 VTPPPVGQVVRDSRPHYTPAAYYH 140
V PPP Q R + Y P AYYH
Sbjct: 95 VAPPPQFQAARPAPIQYHPMAYYH 118
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 682 TPDTLSSFDSTAVTEQSSITPTPLSVASLIRDIQSKCGSPTPSPGIHRPPSTSSTF 515
TP T S+ + ++ E+ PT + AS + + PTPS I +PP T++ F
Sbjct: 16 TPTTSSNIELHSINEE----PTTVHPASS-ENSEDVPADPTPSSSISQPPPTTTLF 66
>Z77667-3|CAB01237.1| 527|Caenorhabditis elegans Hypothetical
protein M04B2.4 protein.
Length = 527
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 384 GSLLLARTRDRMTVYRRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDV-LGGLWIPGDG 560
G L LA+T + + + R + L++ + + +P +NV+DV L L + +G
Sbjct: 187 GYLRLAKTDEEVEMMRSAWKVQIERGAKVQLLSKDELTKRYPYMNVDDVLLASLGVENEG 246
Query: 561 VGDPHLLCMSLMRE 602
D L +S +RE
Sbjct: 247 TIDTWQL-LSAIRE 259
>Z67755-5|CAA91758.2| 966|Caenorhabditis elegans Hypothetical
protein F54F7.5 protein.
Length = 966
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 250 PCTHFFFLDDYGSVTPPPVGQVVRDSRPHYTPAAYYHLCFGW 125
PC H +DDY PPPV + + +P + Y L W
Sbjct: 325 PCRHL--VDDYSMCAPPPVSSL--SYNWNLSPTSEYELLIKW 362
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -1
Query: 712 SHSIAPFVVSTPDTLSSFDSTAVTEQSSITPTPLSVASLIRDIQSKCGSPTPSPGIHRPP 533
S ++ P V +P +S + A ++ + T + + S + D S GS P P P
Sbjct: 22 SSTVIPSTVPSPTGDTSQVTGASSDSTGSTGSSAAPGSTVTD-GSNTGSTAPVPSTTPTP 80
Query: 532 STSSTFSIGNN 500
STF + N+
Sbjct: 81 MKFSTFPVSND 91
>AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear receptor
NHR-88 protein.
Length = 598
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 429 RRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVL 533
++MKS + S SID L +P C P+ N EDV+
Sbjct: 127 KKMKSDTNSGSIDASLPSPNGCDS--PVSNNEDVI 159
>AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein.
Length = 966
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 250 PCTHFFFLDDYGSVTPPPVGQVVRDSRPHYTPAAYYHLCFGW 125
PC H +DDY PPPV + + +P + Y L W
Sbjct: 325 PCRHL--VDDYSMCAPPPVSSL--SYNWNLSPTSEYELLIKW 362
>AC006671-3|AAR30203.1| 235|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform c protein.
Length = 235
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 429 RRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVL 533
++MKS + S SID L +P C P+ N EDV+
Sbjct: 122 KKMKSDTNSGSIDASLPSPNGCDS--PVSNNEDVI 154
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 429 RRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVL 533
++MKS + S SID L +P C P+ N EDV+
Sbjct: 122 KKMKSDTNSGSIDASLPSPNGCDS--PVSNNEDVI 154
>AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform a protein.
Length = 593
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 429 RRMKSQSVSWSIDCDLVTPKKCHELFPMLNVEDVL 533
++MKS + S SID L +P C P+ N EDV+
Sbjct: 122 KKMKSDTNSGSIDASLPSPNGCDS--PVSNNEDVI 154
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = -1
Query: 712 SHSIAPFVVSTPDTLSSFDSTAVTEQSSITPTPLSVASLIRDIQSKCGSPTPSPGIHRPP 533
S S +P T T + ST SS TP+ + +S+ S S +
Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTK 539
Query: 532 STSSTFSIGNNS*HFFGVTKSQSMLHDT 449
S ++T S G N F+ V K+ + +D+
Sbjct: 540 SETTTSSDGTNP-DFYFVEKATTTFYDS 566
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = -1
Query: 712 SHSIAPFVVSTPDTLSSFDSTAVTEQSSITPTPLSVASLIRDIQSKCGSPTPSPGIHRPP 533
S S +P T T + ST SS TP+ + +S+ S S +
Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTTTK 539
Query: 532 STSSTFSIGNNS*HFFGVTKSQSMLHDT 449
S ++T S G N F+ V K+ + +D+
Sbjct: 540 SETTTSSDGTNP-DFYFVEKATTTFYDS 566
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 8.0
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -1
Query: 655 STAVTEQSSI----TPTPLSVASLIRDIQSKCGSPTPSPGIHRPPSTSSTFSIGNNS*HF 488
STAVT SS+ +P P S+++ I S S +PS P S+ +I ++S F
Sbjct: 20 STAVTSPSSLGTSSSPLPSSISTSALPIASSSASSSPSAASSTTPVVLSSSTIQSSSGTF 79
Query: 487 -FGVTKSQSMLHDT 449
V S S + T
Sbjct: 80 PSSVASSPSTVGST 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,160,750
Number of Sequences: 27780
Number of extensions: 462870
Number of successful extensions: 1399
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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