Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_A02
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   5.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   5.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   5.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 561 HHHLESTGLQAH 526
           HHHL+ST +Q H
Sbjct: 148 HHHLQSTAVQDH 159


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 245 AGSRWHSSGLXWSIQAN 295
           A   W++ G  W+I+AN
Sbjct: 53  ANITWYNEGQAWNIEAN 69


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 245 AGSRWHSSGLXWSIQAN 295
           A   W++ G  W+I+AN
Sbjct: 53  ANITWYNEGQAWNIEAN 69


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -1

Query: 610 SVASLIRDIQSKCGSPTPSPGIHRPPSTSSTFS 512
           S A +   +     SP+P+P I   PS+S++ S
Sbjct: 496 STAVIHEPVVETNSSPSPNPRIASAPSSSTSSS 528


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,323
Number of Sequences: 438
Number of extensions: 5668
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)