Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P24.2
         (1205 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90...    34   0.26 
03_06_0311 + 33054022-33054118,33056109-33056353,33057058-330573...    29   5.5  

>08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831,
            901912-902016,902245-902391,903273-903354,903445-903786,
            903873-904177,904259-904435,904799-904852,905171-905254,
            905855-905968,906048-906321,907552-907926,908003-908267,
            908352-908538,908615-909052,909895-909966,910037-910630,
            911471-911623,911700-911828,912326-912657,912705-912840,
            913046-913491,913580-915087,915169-915431,915622-915738,
            915844-916014,916743-916845,916930-916988,918360-918461,
            918560-918649,918727-918877,919745-919830,919926-920102,
            920915-920978,921859-922008,923132-923211,923311-923376,
            924540-924747,925502-925575,925761-925848,926140-926312,
            926541-926609,926698-926741,927074-927167,927290-927366,
            927475-927552,927992-928085
          Length = 3314

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -1

Query: 362  PVSENAPFGLLVGVPFILSP-VXNNQTKRPTNRMPQNFFTDTCGIHCR 222
            PV     FGL +GVP+     +    T    NR+P+ FF+  C +  R
Sbjct: 1268 PVENQHFFGLRLGVPYFFGEFISTGSTAEFANRIPKEFFSSECMVSSR 1315


>03_06_0311 + 33054022-33054118,33056109-33056353,33057058-33057398,
            33057488-33057538,33057623-33057695,33058229-33058333,
            33060124-33060206,33061209-33061249,33061659-33063120,
            33063368-33064847,33064958-33065122,33065232-33065424,
            33065502-33065613,33065702-33065849,33065951-33066148,
            33066234-33066512,33066612-33066773,33066872-33067090,
            33067481-33067612
          Length = 1861

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/70 (22%), Positives = 35/70 (50%)
 Frame = -2

Query: 484  ASIDHTRMTXRSFSKRVRRIRGTALDSCRXXXPLILLLSAHPSQKMHLSAFWLEFHSSCL 305
            A ++ +R T  +  K+ +++RG  L+      P++       +  M +S  W E++++  
Sbjct: 934  AKMEESRHTKLAIKKKSQQMRGENLNPSAKMGPILRKKLMRATTTMLISKIWGEYYATYF 993

Query: 304  P*XTIKQNDR 275
            P  T K+ D+
Sbjct: 994  PGDT-KEEDQ 1002


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,465,809
Number of Sequences: 37544
Number of extensions: 252717
Number of successful extensions: 531
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3689769684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)