Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P23.2
         (1226 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0460 - 8654283-8654302,8654669-8654847,8654940-8655125,865...    31   1.4  
03_02_0248 + 6783643-6783794,6784912-6784947,6785977-6785998,678...    29   5.7  
09_02_0096 - 4221935-4222231                                           29   9.9  
03_03_0021 + 13808274-13808384,13809036-13809200,13809249-138092...    29   9.9  

>03_02_0460 -
           8654283-8654302,8654669-8654847,8654940-8655125,
           8655626-8655781,8656223-8656431,8657254-8657358
          Length = 284

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 356 IRRIKDILFSALAFPLSMFVGITFWGIYAIDRELILPRSLDP--YFPTWLNHVMHTNIMA 529
           +R+ K + FS   + L+ +  +  W +  I +E   P SLD   YF  W N  M +++M 
Sbjct: 54  VRQAKIVKFSESIWKLTYYGSVQAWVLLIIKQE---PWSLDTMQYFEGWPNQYMTSSLML 110

Query: 530 FIL 538
           F +
Sbjct: 111 FYM 113


>03_02_0248 +
           6783643-6783794,6784912-6784947,6785977-6785998,
           6786368-6786440,6786541-6786638
          Length = 126

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +2

Query: 614 CYMVWIHVIYFKTGSWVYPILNILNWPLRVVFYLVCLGLVCSLYSLGEKFNKLVWSKEVE 793
           C M +   + ++ G   + IL  ++WPL  ++ L+        YS+G   +    S E+ 
Sbjct: 9   CQMAFGFKMLYEEGQGDFVILFFIDWPLVDIYELI--------YSIGTTKSSSTGSLEIH 60

Query: 794 QTVKSGKK 817
           Q++  G K
Sbjct: 61  QSISDGSK 68


>09_02_0096 - 4221935-4222231
          Length = 98

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 353 LIRRIKDILFSALAFPLSMFVGITFWGIYAIDRELILPRSLDPYFPTWLN 502
           LIR +  I+ +A++F L +   +TFW I  I  + +     DPY  T LN
Sbjct: 6   LIRNVVGIVGNAISFGLFLSPVLTFWRI--IKEKDMKYFKADPYLATLLN 53


>03_03_0021 +
           13808274-13808384,13809036-13809200,13809249-13809278,
           13809279-13809397,13809696-13809770,13812071-13812146,
           13813224-13813289,13813364-13813462,13814072-13814174,
           13814338-13814411
          Length = 305

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -2

Query: 163 VXSTQKVKEELQHCWCLIXR 104
           V S  +V+++L HCWC++ R
Sbjct: 97  VSSELQVRKDLVHCWCILLR 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,911,046
Number of Sequences: 37544
Number of extensions: 459976
Number of successful extensions: 876
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3771247248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)