Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_P23.2
(1226 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical pr... 87 2e-17
Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical pr... 83 4e-16
AC199167-2|ABO33246.1| 222|Caenorhabditis elegans Hypothetical ... 66 6e-11
U41556-10|AAM51520.1| 415|Caenorhabditis elegans Hypothetical p... 33 0.31
AL021448-2|CAA16277.2| 339|Caenorhabditis elegans Hypothetical ... 31 1.7
AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical... 30 2.9
Z78539-8|CAE17715.1| 223|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z69661-7|CAE17832.1| 223|Caenorhabditis elegans Hypothetical pr... 30 3.8
AL110500-13|CAB54495.1| 791|Caenorhabditis elegans Hypothetical... 29 5.1
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 29 6.7
Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical pr... 29 8.9
>Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical
protein C37E2.2a protein.
Length = 225
Score = 87.4 bits (207), Expect = 2e-17
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Frame = +2
Query: 233 YAGKXKYLTHLNAIMQTLYFTLALLNDLFGNNEPTPSEKPLIRRIKDILFSALAFPLSMF 412
Y K LT+LN ++ Y + LL SEK +++I D + FP+ M
Sbjct: 35 YVYKLVMLTNLNFVLCVFYSVMILLG--------YKSEK--LQKISDFMHFTSIFPVGMI 84
Query: 413 VGITFWGIYAIDRELILPRSLDPYFPTWLNHVMHTNIMAFILIDLLTSFRMYPRKKIGLS 592
FWG+YAI+ L++P + P+WLNH+ HT + FI++D R P+ L
Sbjct: 85 TCGLFWGLYAINPALVMPDWIAKLIPSWLNHITHTYPIIFIILDSYFHKRTPPKTIASLI 144
Query: 593 VLCTYMLCYMVWIHVIYFKTGSWVYPILNILNWPLRVVFYLVCLGLVCSLYSLGEKFNKL 772
+ Y + I + F G W+YPIL++ + V+ Y++ L + NKL
Sbjct: 145 FSAALVFVYFMIICYVRFFDGYWLYPILSLFAFEHFVISYIIGFLGFFMLIKAAVRLNKL 204
Query: 773 VWSK-EVEQTVKSGKKKAK 826
K ++ + S K K
Sbjct: 205 FHQKDDIGSKLPSNMNKKK 223
>Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical
protein C37E2.3 protein.
Length = 295
Score = 83.0 bits (196), Expect = 4e-16
Identities = 47/179 (26%), Positives = 83/179 (46%)
Frame = +2
Query: 233 YAGKXKYLTHLNAIMQTLYFTLALLNDLFGNNEPTPSEKPLIRRIKDILFSALAFPLSMF 412
Y K LT+L ++ +Y TL ++ G T I+ + D + FP+++
Sbjct: 114 YIYKLILLTNLAFVLNVVYSTLVVI----GYKSKT------IKEVVDFMHFTAMFPVAVI 163
Query: 413 VGITFWGIYAIDRELILPRSLDPYFPTWLNHVMHTNIMAFILIDLLTSFRMYPRKKIGLS 592
+ FWG Y D +L++P + P+WLNH+ HT ++ FIL+D R P
Sbjct: 164 LCGMFWGFYVYDSDLVMPAWVAEIVPSWLNHINHTYLIVFILLDSYYHKRDAPSNSTSWM 223
Query: 593 VLCTYMLCYMVWIHVIYFKTGSWVYPILNILNWPLRVVFYLVCLGLVCSLYSLGEKFNK 769
+ Y+ Y + + + + WVYP+L + L V+ Y++ + + L K N+
Sbjct: 224 ISVVYVTFYFIIVLGVKYYNRMWVYPVLQSFSIDLFVISYILSVVIFFILLKAACKLNR 282
>AC199167-2|ABO33246.1| 222|Caenorhabditis elegans Hypothetical
protein cTel55X.1a protein.
Length = 222
Score = 65.7 bits (153), Expect = 6e-11
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Frame = +2
Query: 251 YLTHLNAIMQTLYFTLALLNDLFGNNEPTPSEKPLIRRIKDILFSALAFPLSMFVGITFW 430
+LT ++ MQ LY T+ + + +P+++ +I D AL P+ + V + FW
Sbjct: 42 WLTIIDLYMQLLYHTIGFILAVV-----SPNKRHIIF---DYWARALTGPIGVAVTVLFW 93
Query: 431 GIYAIDRELILPRSLDPYFPT--WLNHVMHTNIMAFILIDL-LTSFRMYPRKKIGLSVLC 601
G++ D + + T W NH +HT +DL + + + I L +
Sbjct: 94 GLFLFDPATLARDEMAMKILTLFWFNHGLHTLPAITAHLDLAIYNHTSFSTSAI-LKGIA 152
Query: 602 TYMLCYMVWIHVIYFKTGSWVYPILNILNWPLRVVFYLVCLGLV 733
++ Y++ +H +++ +G W YPIL L P R+VF C+ +V
Sbjct: 153 VFVTLYLIDLHYVFYTSGFWAYPILGELAAPFRLVFIAACMFIV 196
>U41556-10|AAM51520.1| 415|Caenorhabditis elegans Hypothetical
protein C25B8.7 protein.
Length = 415
Score = 33.5 bits (73), Expect = 0.31
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = +2
Query: 485 FPTWLNHVMHTNIMAFILIDLLTSFRMYPRKKIGLSVLCTYMLCYMVWIHVIYFKTGSWV 664
F W+ + + + ID L F + I +S + CY+ WI I F T W+
Sbjct: 131 FANWVGLAVSGLSLTLLNIDKLIFFCWPFKYDIWMSYFRAKLFCYLSWIISIGFATYYWM 190
Query: 665 YPILNILNWPLRVVF 709
Y + +N + + F
Sbjct: 191 YSYMYFVNATVDIQF 205
>AL021448-2|CAA16277.2| 339|Caenorhabditis elegans Hypothetical
protein Y2H9A.2 protein.
Length = 339
Score = 31.1 bits (67), Expect = 1.7
Identities = 26/97 (26%), Positives = 46/97 (47%)
Frame = +2
Query: 356 IRRIKDILFSALAFPLSMFVGITFWGIYAIDRELILPRSLDPYFPTWLNHVMHTNIMAFI 535
+ R+K + L S+F G+TFW +A E+ILP + +FP + N T ++ I
Sbjct: 122 LTRLKLVKIVLLILIPSLFQGLTFWTSFA-PLEIILPLA-KKWFPQY-NFEAETGVLTGI 178
Query: 536 LIDLLTSFRMYPRKKIGLSVLCTYMLCYMVWIHVIYF 646
+D+ Y I L + Y+ +++ +I F
Sbjct: 179 -VDITHWAATYAVFNICLPIFPIYIAIFILRQKIITF 214
>AL132862-30|CAB60565.3| 716|Caenorhabditis elegans Hypothetical
protein Y73F8A.1 protein.
Length = 716
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 312 SFKSANVKYKVCIIAFKWVKYFXFPAYGVTMAEVLGTXT 196
S +++ + K C++ WVK F F + TM+++ T T
Sbjct: 404 SSENSYLNIKACVVFVAWVKVFKFISVNKTMSQLSSTLT 442
>Z78539-8|CAE17715.1| 223|Caenorhabditis elegans Hypothetical
protein F48F7.8 protein.
Length = 223
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 437 YAIDRELILPRSLDPYFPTWLNHVMHTNIMAFILIDLLTSFRMYPRKKIGLSVLCTYMLC 616
Y++ + IL YF WL+ + ++ +IL+ T + ++I S+ Y+L
Sbjct: 116 YSLASQNILLSGFAEYFTLWLHRIFYSLASPYILLSGFTEYFTLWLRRIFYSLASPYILL 175
Query: 617 ------YMVWIHVIYFKTGS 658
+ +W++ I++ S
Sbjct: 176 SGFTEYFTLWLYRIFYSLAS 195
>Z69661-7|CAE17832.1| 223|Caenorhabditis elegans Hypothetical
protein F48F7.8 protein.
Length = 223
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 437 YAIDRELILPRSLDPYFPTWLNHVMHTNIMAFILIDLLTSFRMYPRKKIGLSVLCTYMLC 616
Y++ + IL YF WL+ + ++ +IL+ T + ++I S+ Y+L
Sbjct: 116 YSLASQNILLSGFAEYFTLWLHRIFYSLASPYILLSGFTEYFTLWLRRIFYSLASPYILL 175
Query: 617 ------YMVWIHVIYFKTGS 658
+ +W++ I++ S
Sbjct: 176 SGFTEYFTLWLYRIFYSLAS 195
>AL110500-13|CAB54495.1| 791|Caenorhabditis elegans Hypothetical
protein Y87G2A.12 protein.
Length = 791
Score = 29.5 bits (63), Expect = 5.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 598 LYIYVVLHGLDSCNIF*NW 654
LYI+ + HGL +CN+F W
Sbjct: 712 LYIFSIPHGLSTCNVFSIW 730
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2
Query: 871 KYILAIHYMNSINSLFCFFLSRFNSLFYFF 782
KY LA Y S N F FF RF S +FF
Sbjct: 201 KYCLAERYQISDNIHFYFFFIRFASSIFFF 230
>Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical
protein K08E4.5 protein.
Length = 357
Score = 28.7 bits (61), Expect = 8.9
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 575 KKIGLSVLCTYMLCYMVWIHVIYFKTGSWVYPILNILNW 691
K+I + + Y+ WI +I+F T W Y + W
Sbjct: 234 KEISTVISINSVNYYLFWISIIHFSTSFWYYFSVETKQW 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,407,615
Number of Sequences: 27780
Number of extensions: 442295
Number of successful extensions: 1028
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -