Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P23.2
         (1226 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   4.1  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   4.1  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   4.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   7.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   7.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   7.2  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   9.5  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   9.5  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 704 VFYLVCLGLVC 736
           +F LVCLG+VC
Sbjct: 4   LFMLVCLGIVC 14


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 704 VFYLVCLGLVC 736
           +F LVCLG+VC
Sbjct: 4   LFMLVCLGIVC 14


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 704 VFYLVCLGLVC 736
           +F LVCLG+VC
Sbjct: 4   LFMLVCLGIVC 14


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 422 TFWGIYAIDRELILPRSLDPYFPTWLNHV 508
           T W  Y I   L+  +S     P+W N++
Sbjct: 170 TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 198


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 422 TFWGIYAIDRELILPRSLDPYFPTWLNHV 508
           T W  Y I   L+  +S     P+W N++
Sbjct: 185 TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 213


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 422 TFWGIYAIDRELILPRSLDPYFPTWLNHV 508
           T W  Y I   L+  +S     P+W N++
Sbjct: 73  TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 101


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = +2

Query: 602 TYMLCYMVWIHVI 640
           +Y++CY +W++ +
Sbjct: 215 SYLVCYGIWVYFV 227


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = +2

Query: 602 TYMLCYMVWIHVI 640
           +Y++CY +W++ +
Sbjct: 91  SYLVCYGIWVYFV 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,258
Number of Sequences: 438
Number of extensions: 5718
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 41781924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)