Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P21.2
         (1289 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504...    34   0.21 
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.5  
03_02_0122 - 5742530-5743705                                           31   1.5  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   3.4  
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    30   4.6  
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129...    29   6.0  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.0  

>07_01_0674 +
           5047503-5047646,5047808-5047901,5048743-5048828,
           5049380-5049429,5049517-5049586,5049668-5049749,
           5049867-5050267,5050414-5050941,5051823-5052044
          Length = 558

 Score = 34.3 bits (75), Expect = 0.21
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -2

Query: 505 PXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
           P PPPKP       G     P   PP P            PPPPP
Sbjct: 233 PPPPPKPANIAGAPGLPLPPPPPPPPGPPPREIVPGQTLLPPPPP 277


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
 Frame = -2

Query: 529 SPLWGGXXPXPPPKPXXXG---FFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
           SP      P PPP P   G    F       P   PP P            PPPPP
Sbjct: 538 SPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPP 593



 Score = 29.1 bits (62), Expect = 8.0
 Identities = 15/52 (28%), Positives = 16/52 (30%)
 Frame = -2

Query: 526 PLWGGXXPXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
           P +    P PPP P             P   PP P            PPPPP
Sbjct: 559 PAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPP 610


>03_02_0122 - 5742530-5743705
          Length = 391

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 18/61 (29%), Positives = 23/61 (37%)
 Frame = +3

Query: 372 GGGGGXFXXXKKXXXPXGXGGXXLGXXXXXPXKKPXXXGXGGGXGXXPPQRGEKGXPXKR 551
           GGGGG +   +    P G GG   G       KK    G G   G     +  +G   K+
Sbjct: 307 GGGGGRYEEEEGYKKPSGHGGGRYGKEEEEDDKKKKKHGEGSEGGMGDYLKLAQGLMKKQ 366

Query: 552 G 554
           G
Sbjct: 367 G 367


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 20/57 (35%), Positives = 20/57 (35%)
 Frame = -2

Query: 541  GXPFSPLWGGXXPXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
            G P     GG  P PPP P   G   G         PP P G          PPPPP
Sbjct: 1172 GTPPPNAHGGVAP-PPPPPRGHGGVGGPPTPPGAPAPPMPPG------VPGGPPPPP 1221


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 13/45 (28%), Positives = 16/45 (35%)
 Frame = -2

Query: 505 PXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
           P PPP P     + G      +  PP P          +  PPPP
Sbjct: 129 PPPPPPPFKGDHYGGVYQNWQQNGPPPPPDHVLKKVPSHPSPPPP 173


>10_08_0630 -
           19410852-19411235,19411370-19412257,19412440-19412941,
           19413662-19414135,19414982-19415040,19415468-19415629
          Length = 822

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 15/45 (33%), Positives = 16/45 (35%)
 Frame = +3

Query: 372 GGGGGXFXXXKKXXXPXGXGGXXLGXXXXXPXKKPXXXGXGGGXG 506
           GGGGG      +   P G GG         P   P     GGG G
Sbjct: 93  GGGGGGGGSSMQQQQPGGGGGGVQQFGAVAPEMSPFSPAGGGGGG 137


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +2

Query: 644 PPPKKXXKKXXPNXXGGXPXGXXKNPGXPPXKPPXG 751
           PPP        P   G  P    K P  PP  PP G
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.313    0.147    0.475 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,060,162
Number of Sequences: 37544
Number of extensions: 357417
Number of successful extensions: 927
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)