Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_P21.2
(1289 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 35 0.11
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 35 0.11
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 7.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 7.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.1
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 505 PXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P PPP P G P PP P G PPPPP
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 35.1 bits (77), Expect = 0.11
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 505 PXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P PPP P G P PP P G PPPPP
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 526 PLWGGXXPXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P+ GG P PPP G P PP P G PPPPP
Sbjct: 721 PITGGPPPPPPP-----GGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -2
Query: 526 PLWGGXXPXPPPK--PXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P+ GG P PPP P G P PP P PPPPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 553 PLFXGXPFSPLWGGXXPXPPPKPXXXGFFXGXXXXXP 443
P+ G P P G P PPP P GF G P
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 526 PLWGGXXPXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P+ GG P PPP G P PP P G PPPPP
Sbjct: 721 PITGGPPPPPPP-----GGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPP 765
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -2
Query: 526 PLWGGXXPXPPPK--PXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P+ GG P PPP P G P PP P PPPPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 553 PLFXGXPFSPLWGGXXPXPPPKPXXXGFFXGXXXXXP 443
P+ G P P G P PPP P GF G P
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 526 PLWGGXXPXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P+ GG P PPP G P PP P G PPPPP
Sbjct: 304 PITGGPPPPPPP-----GGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPP 348
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -2
Query: 526 PLWGGXXPXPPPK--PXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P+ GG P PPP P G P PP P PPPPP
Sbjct: 320 PITGGPPPPPPPGGLPPISGG-PPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 553 PLFXGXPFSPLWGGXXPXPPPKPXXXGFFXGXXXXXP 443
P+ G P P G P PPP P GF G P
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 917 PPXGXXGGFFXPPPFXGXPLPXXXKPPRXXXXXXPXXPXXKT 792
PP GG PPP G P P PP P P KT
Sbjct: 96 PPPPMMGGIPPPPPMFGAPPP---PPPPSGLGVAPQPPRPKT 134
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 535 PFSPLWGGXXPXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P P G P PPP P G G P PP P PPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPP--GRTPGPPGM-PGMPPPPPPSRFGPPGMGGMPPPPP 338
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -2
Query: 535 PFSPLWGGXXPXPPPKPXXXGFFXGXXXXXPKXXPPXPXGXXXFXXXXNXPPPPP 371
P P G P PPP P G G P PP P PPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPP--GRTPGPPGM-PGMPPPPPPSRFGPPGMGGMPPPPP 348
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -2
Query: 547 FXGXPFSPLWGGXXPXPPPKPXXXGFFXGXXXXXP-KXXPPXPXGXXXFXXXXNXPPPPP 371
F G +P G P PPPK G P PP P PPPPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -2
Query: 547 FXGXPFSPLWGGXXPXPPPKPXXXGFFXGXXXXXP-KXXPPXPXGXXXFXXXXNXPPPPP 371
F G +P G P PPPK G P PP P PPPPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -2
Query: 547 FXGXPFSPLWGGXXPXPPPKPXXXGFFXGXXXXXP-KXXPPXPXGXXXFXXXXNXPPPPP 371
F G +P G P PPPK G P PP P PPPPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.147 0.475
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,192,093
Number of Sequences: 27780
Number of extensions: 246045
Number of successful extensions: 706
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3610322468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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