Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P20.2
         (1235 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           83   4e-16
01_06_1461 - 37520885-37520965,37521366-37521461,37522160-37522297     36   0.087
03_04_0043 + 16747103-16747137,16747237-16747259,16748735-167488...    34   0.26 
07_03_1222 - 24983294-24983356,24983695-24983858,24985209-249852...    30   4.3  
03_02_0763 - 10977793-10978092,10978896-10978996,10979580-109796...    29   5.7  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 83.0 bits (196), Expect = 4e-16
 Identities = 40/80 (50%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
 Frame = +3

Query: 126 KNNXLQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKI-KSKNSK-TADRE 299
           K + + Q +N  +RV +Q  R  +G F AFD+HM L+LG C  FRK+  SK+SK T +RE
Sbjct: 5   KGSKMLQFVNYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKSSKTTGERE 64

Query: 300 XKRTLGFVLLRGENIVSLTI 359
            +RTLG +LLRGE +VS+T+
Sbjct: 65  ERRTLGLLLLRGEEVVSMTV 84


>01_06_1461 - 37520885-37520965,37521366-37521461,37522160-37522297
          Length = 104

 Score = 35.5 bits (78), Expect = 0.087
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +3

Query: 150 LNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTAD---REXKRTLGF 320
           L+  + V L++ R   G   A+D+H+ +ILG           + +T +   R  KRT+ F
Sbjct: 27  LDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTIPF 86

Query: 321 VLLRGENIV 347
           + +RG+ ++
Sbjct: 87  LFVRGDGVI 95


>03_04_0043 +
           16747103-16747137,16747237-16747259,16748735-16748856,
           16748980-16749042
          Length = 80

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/77 (23%), Positives = 41/77 (53%)
 Frame = +3

Query: 123 GKNNXLQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTADREX 302
           G+   L+++++  +++ L A+R  +GT + FD+ M L++            N+   +   
Sbjct: 5   GQPPDLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVV-----------DNTVEVNGND 53

Query: 303 KRTLGFVLLRGENIVSL 353
           K  +G V++RG ++V +
Sbjct: 54  KTDIGMVVVRGNSVVMI 70


>07_03_1222 -
           24983294-24983356,24983695-24983858,24985209-24985231,
           24985340-24985374
          Length = 94

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +3

Query: 168 VILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTADREXKRTLGFVLLRGENIV 347
           V L A+R  IGT + FD+ M L++            N+   +   K  +G V++RG ++V
Sbjct: 34  VKLNANRVVIGTLRGFDQFMNLVV-----------DNTVEVNGNEKNDIGMVVIRGNSVV 82

Query: 348 SL 353
            +
Sbjct: 83  MI 84


>03_02_0763 -
           10977793-10978092,10978896-10978996,10979580-10979648,
           10979787-10979857,10979946-10980100,10980348-10980477,
           10980946-10981013,10981335-10981592
          Length = 383

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 539 SWSTFCSSSNARRPHDGWPSSRNDGSSSWHGSWW 640
           SW+  C   +   P +   +++ND    WHG+WW
Sbjct: 213 SWNPHCRYLDGIGPKENNSNAQND----WHGAWW 242


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,468,303
Number of Sequences: 37544
Number of extensions: 355541
Number of successful extensions: 3383
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3191
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3806166204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)