Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P20.2
         (1235 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L02919-1|AAA28858.1|  199|Drosophila melanogaster ribonucleoprot...   137   3e-32
AY061171-1|AAL28719.1|  199|Drosophila melanogaster LD14049p pro...   137   3e-32
AE014134-1881|AAF52947.1|  199|Drosophila melanogaster CG5352-PA...   137   3e-32
BT023632-1|AAY85032.1|   95|Drosophila melanogaster IP05684p pro...    38   0.037
AE014296-355|AAF47567.1|   95|Drosophila melanogaster CG2021-PA ...    38   0.037
AE013599-3518|AAN16119.1|  281|Drosophila melanogaster CG32834-P...    31   2.5  
BT001552-1|AAN71307.1|  103|Drosophila melanogaster RE11655p pro...    31   4.3  
AE014297-3433|AAN13967.1|  103|Drosophila melanogaster CG31184-P...    31   4.3  

>L02919-1|AAA28858.1|  199|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 199

 Score =  137 bits (332), Expect = 3e-32
 Identities = 75/146 (51%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
 Frame = +3

Query: 114 MPLGKNNXLQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTAD 293
           M +GKNN + QHLN  VR++LQ SRTFIGTFKAFDKHM LILG C  FRKI+SKNSK  +
Sbjct: 1   MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60

Query: 294 REXKRTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 467
           RE KR LGFVLLRGENIVSLT+                                      
Sbjct: 61  REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120

Query: 468 XXXXXXXXXRGVGGPSQQHMAPGNRG 545
                    RGVGGP+QQHMAP  RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146


>AY061171-1|AAL28719.1|  199|Drosophila melanogaster LD14049p
           protein.
          Length = 199

 Score =  137 bits (332), Expect = 3e-32
 Identities = 75/146 (51%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
 Frame = +3

Query: 114 MPLGKNNXLQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTAD 293
           M +GKNN + QHLN  VR++LQ SRTFIGTFKAFDKHM LILG C  FRKI+SKNSK  +
Sbjct: 1   MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60

Query: 294 REXKRTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 467
           RE KR LGFVLLRGENIVSLT+                                      
Sbjct: 61  REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120

Query: 468 XXXXXXXXXRGVGGPSQQHMAPGNRG 545
                    RGVGGP+QQHMAP  RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146


>AE014134-1881|AAF52947.1|  199|Drosophila melanogaster CG5352-PA
           protein.
          Length = 199

 Score =  137 bits (332), Expect = 3e-32
 Identities = 75/146 (51%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
 Frame = +3

Query: 114 MPLGKNNXLQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTAD 293
           M +GKNN + QHLN  VR++LQ SRTFIGTFKAFDKHM LILG C  FRKI+SKNSK  +
Sbjct: 1   MTIGKNNKMIQHLNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPE 60

Query: 294 REXKRTLGFVLLRGENIVSLTI--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 467
           RE KR LGFVLLRGENIVSLT+                                      
Sbjct: 61  REEKRVLGFVLLRGENIVSLTVEGPPPPEEGLPRVPIPGAAPGPGIGRVAGRGMPINLSA 120

Query: 468 XXXXXXXXXRGVGGPSQQHMAPGNRG 545
                    RGVGGP+QQHMAP  RG
Sbjct: 121 VPAGLQGPVRGVGGPAQQHMAPMGRG 146


>BT023632-1|AAY85032.1|   95|Drosophila melanogaster IP05684p
           protein.
          Length = 95

 Score = 37.5 bits (83), Expect = 0.037
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +3

Query: 138 LQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTADREXKRTLG 317
           L+ ++N  V +I    R FIGT K FD+ + +I+  C        +   T     +  LG
Sbjct: 4   LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDEC------HERVFSTTSGIEQIVLG 57

Query: 318 FVLLRGENI 344
             ++RG+NI
Sbjct: 58  LHIIRGDNI 66


>AE014296-355|AAF47567.1|   95|Drosophila melanogaster CG2021-PA
           protein.
          Length = 95

 Score = 37.5 bits (83), Expect = 0.037
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +3

Query: 138 LQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTADREXKRTLG 317
           L+ ++N  V +I    R FIGT K FD+ + +I+  C        +   T     +  LG
Sbjct: 4   LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDEC------HERVFSTTSGIEQIVLG 57

Query: 318 FVLLRGENI 344
             ++RG+NI
Sbjct: 58  LHIIRGDNI 66


>AE013599-3518|AAN16119.1|  281|Drosophila melanogaster CG32834-PA
           protein.
          Length = 281

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 578 PHDG-WPSSRNDGSSSWHGSWWAR 646
           P DG W +    GS+SW GSWW R
Sbjct: 138 PDDGSWCTVSGWGSTSWWGSWWDR 161


>BT001552-1|AAN71307.1|  103|Drosophila melanogaster RE11655p
           protein.
          Length = 103

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +3

Query: 150 LNXXVRVILQASRTFIGTFKAFDKHMXLILGXC---XXFRKIKSKNSKTADREXKRTLGF 320
           L+  V V ++  R   G   AFD+H+ ++LG         +I  +  +   +  KRT+  
Sbjct: 26  LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPM 85

Query: 321 VLLRGENIV 347
           + +RG+ ++
Sbjct: 86  LFVRGDGVI 94


>AE014297-3433|AAN13967.1|  103|Drosophila melanogaster CG31184-PA
           protein.
          Length = 103

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +3

Query: 150 LNXXVRVILQASRTFIGTFKAFDKHMXLILGXC---XXFRKIKSKNSKTADREXKRTLGF 320
           L+  V V ++  R   G   AFD+H+ ++LG         +I  +  +   +  KRT+  
Sbjct: 26  LDEKVYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTTVEIDEETYEEVYKTAKRTIPM 85

Query: 321 VLLRGENIV 347
           + +RG+ ++
Sbjct: 86  LFVRGDGVI 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,567,980
Number of Sequences: 53049
Number of extensions: 560677
Number of successful extensions: 3450
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3326
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6600886020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)