Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P20.2
         (1235 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical pr...    98   1e-20
Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical pr...    33   0.31 
AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical ...    31   2.2  

>Z92773-2|CAB07132.1|  160|Caenorhabditis elegans Hypothetical
           protein W08E3.1 protein.
          Length = 160

 Score = 97.9 bits (233), Expect = 1e-20
 Identities = 45/82 (54%), Positives = 57/82 (69%)
 Frame = +3

Query: 114 MPLGKNNXLQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTAD 293
           M + KNN +  HLN  +++ILQ  RTFIG FKAFDKHM ++L  C   R+IK K  K  D
Sbjct: 1   MTISKNNKMMAHLNYRMKIILQDGRTFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTD 60

Query: 294 REXKRTLGFVLLRGENIVSLTI 359
            E KR LG VL+RGE+IVS+T+
Sbjct: 61  GEEKRILGLVLVRGEHIVSMTV 82


>Z69385-6|CAA93428.1|  104|Caenorhabditis elegans Hypothetical
           protein ZK593.7 protein.
          Length = 104

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +3

Query: 138 LQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILGXCXXFRKIKSKNSKTADREXKRTLG 317
           L + L+  +RV  Q  R   G  + FD+ + ++L  C  + +     S   D    R LG
Sbjct: 16  LTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDE--TRQLG 73

Query: 318 FVLLRGENI 344
            ++ RG  I
Sbjct: 74  LIVARGTAI 82


>AL132865-8|CAB60606.2|  102|Caenorhabditis elegans Hypothetical
           protein Y62E10A.12 protein.
          Length = 102

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
 Frame = +3

Query: 138 LQQHLNXXVRVILQASRTFIGTFKAFDKHMXLILG---XCXXFRKIKSKNSKTADREXKR 308
           L+  L+  V V ++  R   G  +AFD+H+ ++L         R++     +   ++ KR
Sbjct: 21  LRLSLDERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTREVDEDTFEEIYKQTKR 80

Query: 309 TLGFVLLRGENIV 347
            +  + +RG++++
Sbjct: 81  VVPMLFVRGDSVI 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,568,875
Number of Sequences: 27780
Number of extensions: 276605
Number of successful extensions: 1475
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3422502224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)