Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_P18.2
(1261 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O75439 Cluster: Mitochondrial-processing peptidase subu... 99 1e-19
UniRef50_P31930 Cluster: Ubiquinol-cytochrome-c reductase comple... 93 1e-17
UniRef50_Q42290 Cluster: Probable mitochondrial-processing pepti... 71 5e-11
UniRef50_Q23295 Cluster: Putative uncharacterized protein mppb-1... 67 1e-09
UniRef50_Q1ZXD0 Cluster: Mitochondrial processing peptidase beta... 58 4e-07
UniRef50_UPI0000DB7C8A Cluster: PREDICTED: similar to CG3731-PB,... 57 1e-06
UniRef50_Q8MTV6 Cluster: Mitochondrial processing peptidase beta... 57 1e-06
UniRef50_Q9P7X1 Cluster: Probable mitochondrial-processing pepti... 49 3e-04
UniRef50_P07256 Cluster: Ubiquinol-cytochrome-c reductase comple... 46 0.002
UniRef50_O15842 Cluster: Metallo-peptidase, Clan ME, Family M16;... 45 0.004
UniRef50_P98080 Cluster: Uncharacterized peptidase-like protein ... 44 0.006
UniRef50_A4HMG0 Cluster: Mitochondrial processing peptidase, bet... 44 0.011
UniRef50_A7DKE5 Cluster: Peptidase; n=3; Alphaproteobacteria|Rep... 43 0.015
UniRef50_Q0BPV0 Cluster: Peptidase, M16 family; n=8; Alphaproteo... 43 0.019
UniRef50_Q75PZ4 Cluster: Mitochondria bc1 complex core subunit 1... 42 0.044
UniRef50_Q89V74 Cluster: Mitochondrial processing peptidase-like... 38 0.41
UniRef50_Q10713 Cluster: Mitochondrial-processing peptidase subu... 38 0.72
UniRef50_UPI0000DD86E5 Cluster: PREDICTED: hypothetical protein;... 29 2.5
UniRef50_O86835 Cluster: Uncharacterized zinc protease SCO5738; ... 34 8.9
>UniRef50_O75439 Cluster: Mitochondrial-processing peptidase subunit
beta, mitochondrial precursor; n=66; Fungi/Metazoa
group|Rep: Mitochondrial-processing peptidase subunit
beta, mitochondrial precursor - Homo sapiens (Human)
Length = 489
Score = 99 bits (238), Expect = 1e-19
Identities = 40/72 (55%), Positives = 56/72 (77%)
Frame = +2
Query: 146 PVCAALGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPD 325
P+C +GRQMLCYN RIPI L+ARI++V + +R+VC KY+++R PA+AAVGP + LPD
Sbjct: 417 PICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLPD 476
Query: 326 YTRIRGGMYWVR 361
+ +IR M W+R
Sbjct: 477 FKQIRSNMCWLR 488
>UniRef50_P31930 Cluster: Ubiquinol-cytochrome-c reductase complex
core protein 1, mitochondrial precursor; n=22;
Coelomata|Rep: Ubiquinol-cytochrome-c reductase complex
core protein 1, mitochondrial precursor - Homo sapiens
(Human)
Length = 480
Score = 93.1 bits (221), Expect = 1e-17
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +2
Query: 146 PVCAALGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPD 325
PVC +GR +L Y RIP+ ++RI V VR++C KY++D+CPAVA GP E LPD
Sbjct: 408 PVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQCPAVAGYGPIEQLPD 467
Query: 326 YTRIRGGMYWVR 361
Y RIR GM+W+R
Sbjct: 468 YNRIRSGMFWLR 479
>UniRef50_Q42290 Cluster: Probable mitochondrial-processing
peptidase subunit beta, mitochondrial precursor; n=38;
Viridiplantae|Rep: Probable mitochondrial-processing
peptidase subunit beta, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 531
Score = 71.3 bits (167), Expect = 5e-11
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 146 PVCAALGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPD 325
P+ +GRQ+L Y RIP L ARI++V V+ V KY++D+ A++A+GP + LPD
Sbjct: 459 PIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPD 518
Query: 326 YTRIRGGMYWVR 361
Y + R YW R
Sbjct: 519 YNKFRRRTYWNR 530
>UniRef50_Q23295 Cluster: Putative uncharacterized protein mppb-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein mppb-1 - Caenorhabditis elegans
Length = 458
Score = 66.9 bits (156), Expect = 1e-09
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +2
Query: 146 PVCAALGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPD 325
PVC +GRQ+LCY RIP L ARIES+TVQ +RDVC + + + A VG T+ P
Sbjct: 387 PVCEDIGRQLLCYGRRIPTPELHARIESITVQQLRDVCRRVFLEGQVSAAVVGKTQYWPV 446
Query: 326 YTRIRG 343
I G
Sbjct: 447 NEEIHG 452
>UniRef50_Q1ZXD0 Cluster: Mitochondrial processing peptidase beta
subunit; n=3; Dictyostelium discoideum|Rep:
Mitochondrial processing peptidase beta subunit -
Dictyostelium discoideum AX4
Length = 469
Score = 58.4 bits (135), Expect = 4e-07
Identities = 28/71 (39%), Positives = 38/71 (53%)
Frame = +2
Query: 149 VCAALGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDY 328
VC +GRQ+L R+ + RI +TV +V+ V L D PAV A+GP PDY
Sbjct: 398 VCEGIGRQILTLGRRLSPFEVYTRINEITVADVQRVASTLLRDVSPAVTAIGPIANYPDY 457
Query: 329 TRIRGGMYWVR 361
++G YW R
Sbjct: 458 NFVKGWTYWNR 468
>UniRef50_UPI0000DB7C8A Cluster: PREDICTED: similar to CG3731-PB,
isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG3731-PB, isoform B - Apis mellifera
Length = 804
Score = 56.8 bits (131), Expect = 1e-06
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +2
Query: 182 YNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGGMYWVR 361
Y PI A E +TV +R+V KY++D+ P V A+G E LPDY IR G+Y +R
Sbjct: 744 YGCYEPIEQRIAEYEKITVDKIREVSEKYIYDQSPVVIALGRIENLPDYPIIRNGLYLLR 803
>UniRef50_Q8MTV6 Cluster: Mitochondrial processing peptidase beta
subunit; n=11; Apicomplexa|Rep: Mitochondrial processing
peptidase beta subunit - Plasmodium falciparum
Length = 484
Score = 56.8 bits (131), Expect = 1e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 340
+ RQ+L Y +I + R+ + + V+ V +KYL DR AVAA+G G+P Y +R
Sbjct: 417 VSRQLLVYGRKISLAEFILRLNEIDTEEVKRVAWKYLHDRDIAVAAIGALHGMPQYIDLR 476
Query: 341 GGMYWVR 361
YW+R
Sbjct: 477 QKTYWLR 483
>UniRef50_Q9P7X1 Cluster: Probable mitochondrial-processing
peptidase subunit beta, mitochondrial precursor; n=19;
Dikarya|Rep: Probable mitochondrial-processing peptidase
subunit beta, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 457
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/63 (39%), Positives = 38/63 (60%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 340
+GRQ+L R+ +D RI +T ++V V + ++D+ AV+AVG EGL DY RIR
Sbjct: 390 IGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEMIWDKDIAVSAVGSIEGLLDYNRIR 449
Query: 341 GGM 349
+
Sbjct: 450 SSI 452
>UniRef50_P07256 Cluster: Ubiquinol-cytochrome-c reductase complex
core protein 1, mitochondrial precursor; n=6;
Saccharomycetales|Rep: Ubiquinol-cytochrome-c reductase
complex core protein 1, mitochondrial precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 457
Score = 46.0 bits (104), Expect = 0.002
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 340
LG ++L S++ + +I+++TV++V+ K L+D+ A+A G EGL DY RIR
Sbjct: 390 LGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIR 449
Query: 341 GGMYWVR 361
M +R
Sbjct: 450 SDMSMMR 456
>UniRef50_O15842 Cluster: Metallo-peptidase, Clan ME, Family M16;
n=5; Trypanosomatidae|Rep: Metallo-peptidase, Clan ME,
Family M16 - Leishmania major strain Friedlin
Length = 494
Score = 45.2 bits (102), Expect = 0.004
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDY 328
LGRQM+ + R+P+ + R+++VT +++R KYL P V+ +G + LP Y
Sbjct: 411 LGRQMIHFGRRVPLQEVFERVDAVTPESLRAAAEKYLGVVQPTVSCIGASSTLPKY 466
>UniRef50_P98080 Cluster: Uncharacterized peptidase-like protein
F56D2.1; n=3; Rhabditida|Rep: Uncharacterized
peptidase-like protein F56D2.1 - Caenorhabditis elegans
Length = 471
Score = 44.4 bits (100), Expect = 0.006
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 155 AALGRQMLCYNSRI-PIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYT 331
A + L Y + + L+A+I+ V VR+ ++++DR A VG TE P+Y
Sbjct: 401 AGFNAKELLYTGNLRQLSELEAQIQKVDAGAVREAISRHVYDRDLAAVGVGRTEAFPNYA 460
Query: 332 RIRGGMYWVR 361
R GM W R
Sbjct: 461 LTRAGMSWWR 470
>UniRef50_A4HMG0 Cluster: Mitochondrial processing peptidase, beta
subunit, putative; n=7; Trypanosomatidae|Rep:
Mitochondrial processing peptidase, beta subunit,
putative - Leishmania braziliensis
Length = 490
Score = 43.6 bits (98), Expect = 0.011
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDY 328
+GRQ+L Y R+P+ + RI+ T N+++V Y + R P + +G +P+Y
Sbjct: 423 IGRQVLHYGRRVPLTEMYDRIDDTTGTNIQEVLQHYFYGRKPVYSYLGYISAIPNY 478
>UniRef50_A7DKE5 Cluster: Peptidase; n=3; Alphaproteobacteria|Rep:
Peptidase - Methylobacterium extorquens PA1
Length = 431
Score = 43.2 bits (97), Expect = 0.015
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2
Query: 167 RQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIRGG 346
RQ+L + IP L A++++V V++VR + L P +AA+GP +GLP R+
Sbjct: 369 RQLLAWGRVIPPQELIAKVDAVEVEHVR-AAGRTLLRGAPTLAAIGPVKGLPSLARVASA 427
Query: 347 M 349
+
Sbjct: 428 L 428
>UniRef50_Q0BPV0 Cluster: Peptidase, M16 family; n=8;
Alphaproteobacteria|Rep: Peptidase, M16 family -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 426
Score = 42.7 bits (96), Expect = 0.019
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +2
Query: 152 CAALGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYT 331
C + RQ + +P A+I++VT+ +VR V LF P +A +GP +PD
Sbjct: 360 CEQIARQYQIFGRLVPTSETVAKIDAVTLDDVRRVAAA-LFRASPTLATLGPAGHVPDLA 418
Query: 332 RIRGGM 349
RI G +
Sbjct: 419 RISGSL 424
>UniRef50_Q75PZ4 Cluster: Mitochondria bc1 complex core subunit 1;
n=1; Brugia malayi|Rep: Mitochondria bc1 complex core
subunit 1 - Brugia malayi (Filarial nematode worm)
Length = 476
Score = 41.5 bits (93), Expect = 0.044
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 340
+ +Q+L + + L+ IE+V + + + K+++DR AVA +G TE PDY ++R
Sbjct: 409 IAKQVLYSDPGQSLADLENAIENVDKKAISEAINKHVYDRDLAVAGIGRTEAWPDYYQLR 468
Query: 341 GGM 349
GM
Sbjct: 469 IGM 471
>UniRef50_Q89V74 Cluster: Mitochondrial processing peptidase-like
protein; n=13; Rhizobiales|Rep: Mitochondrial processing
peptidase-like protein - Bradyrhizobium japonicum
Length = 429
Score = 38.3 bits (85), Expect = 0.41
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 340
L R +L Y + L ARI++V+V++ RD L PAV A+G GL
Sbjct: 357 LARHVLAYGRPQTVQELVARIDAVSVESTRDAARALLSRSRPAVVALGSGRGLDTAVSFA 416
Query: 341 GGMYWVRA 364
G+ RA
Sbjct: 417 EGLTRARA 424
>UniRef50_Q10713 Cluster: Mitochondrial-processing peptidase subunit
alpha, mitochondrial precursor; n=39; Eumetazoa|Rep:
Mitochondrial-processing peptidase subunit alpha,
mitochondrial precursor - Homo sapiens (Human)
Length = 525
Score = 37.5 bits (83), Expect = 0.72
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGPTEGLPDYTRIR 340
+GRQ+L SR H L I +V ++V+ V K L + PAVAA+G LP Y I+
Sbjct: 449 VGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKMLRGK-PAVAALGDLTDLPTYEHIQ 507
>UniRef50_UPI0000DD86E5 Cluster: PREDICTED: hypothetical protein;
n=3; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 831
Score = 29.1 bits (62), Expect(2) = 4.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 212 QVHGWGCGCCSR 177
Q+ WGCGCCSR
Sbjct: 147 QMLAWGCGCCSR 158
Score = 27.9 bits (59), Expect(2) = 2.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 200 WGCGCCSR 177
WGCGCCSR
Sbjct: 298 WGCGCCSR 305
Score = 26.6 bits (56), Expect(2) = 2.5
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 197 GCGCCSRAFDDQ 162
GCGCCSR+ D Q
Sbjct: 339 GCGCCSRSSDAQ 350
Score = 24.6 bits (51), Expect(2) = 4.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 197 GCGCCSRAFD 168
GCGCCSR D
Sbjct: 192 GCGCCSRLSD 201
>UniRef50_O86835 Cluster: Uncharacterized zinc protease SCO5738;
n=10; Actinomycetales|Rep: Uncharacterized zinc protease
SCO5738 - Streptomyces coelicolor
Length = 459
Score = 33.9 bits (74), Expect = 8.9
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +2
Query: 161 LGRQMLCYNSRIPIHXLDARIESVTVQNVRDVCYKYLFDRCPAVAAVGP 307
+G+ LC+ ++ + + ARI SVT +VR V + + R P+++ +GP
Sbjct: 398 IGKSELCWGEQMSVDDMLARIASVTPDDVRAVA-RDVLGRRPSLSVIGP 445
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,046,796
Number of Sequences: 1657284
Number of extensions: 6137192
Number of successful extensions: 13163
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13110
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 127960015844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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