Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_P11.2
(1312 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 282 2e-75
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 282 2e-75
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 282 2e-75
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 282 2e-75
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 282 2e-75
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 282 2e-75
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 2e-18
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 4.0
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 32 4.0
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 31 7.0
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 31 7.0
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 31 7.0
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 31 7.0
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 31 7.0
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 31 7.0
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 31 7.0
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 31 7.0
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 31 7.0
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 31 7.0
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 31 7.0
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 31 7.0
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 31 7.0
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 31 7.0
BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 31 9.3
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 282 bits (691), Expect = 2e-75
Identities = 136/183 (74%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
Frame = +2
Query: 80 LKAXGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPK 256
+K G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+
Sbjct: 9 VKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQ 68
Query: 257 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 436
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 437 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 616
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 617 FPE 625
FPE
Sbjct: 189 FPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 282 bits (691), Expect = 2e-75
Identities = 136/183 (74%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
Frame = +2
Query: 80 LKAXGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPK 256
+K G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+
Sbjct: 7 VKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQ 66
Query: 257 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 436
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 67 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 126
Query: 437 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 616
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 127 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 186
Query: 617 FPE 625
FPE
Sbjct: 187 FPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 282 bits (691), Expect = 2e-75
Identities = 136/183 (74%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
Frame = +2
Query: 80 LKAXGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPK 256
+K G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+
Sbjct: 9 VKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQ 68
Query: 257 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 436
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 437 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 616
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 617 FPE 625
FPE
Sbjct: 189 FPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 282 bits (691), Expect = 2e-75
Identities = 136/183 (74%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
Frame = +2
Query: 80 LKAXGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPK 256
+K G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+
Sbjct: 9 VKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQ 68
Query: 257 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 436
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 437 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 616
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 617 FPE 625
FPE
Sbjct: 189 FPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 282 bits (691), Expect = 2e-75
Identities = 136/183 (74%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
Frame = +2
Query: 80 LKAXGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPK 256
+K G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+
Sbjct: 9 VKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQ 68
Query: 257 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 436
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 437 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 616
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 617 FPE 625
FPE
Sbjct: 189 FPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 282 bits (691), Expect = 2e-75
Identities = 136/183 (74%), Positives = 160/183 (87%), Gaps = 1/183 (0%)
Frame = +2
Query: 80 LKAXGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPK 256
+K G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+
Sbjct: 9 VKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQ 68
Query: 257 LKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDA 436
LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DA
Sbjct: 69 LKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDA 128
Query: 437 ILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFE 616
ILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FE
Sbjct: 129 ILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFE 188
Query: 617 FPE 625
FPE
Sbjct: 189 FPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 2e-18
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +2
Query: 407 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 562
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 32.3 bits (70), Expect = 4.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 579 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 445
T W ++ LCS++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 32.3 bits (70), Expect = 4.0
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 68 VRRSLKAXGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYV 244
++R+L+A + + VE ET S K Q +++ + KE+ E+HNK+ +
Sbjct: 568 LKRALEAKELARQHLRDQLDE--VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQK 623
Query: 245 PMPKLKAFQKIQIRLVRELEKK 310
M + QK Q R + ELEKK
Sbjct: 624 SMEAERLKQKEQERKIIELEKK 645
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 31.5 bits (68), Expect = 7.0
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 125 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 292
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 293 RELEKKFSGK 322
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 7.0
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 125 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 292
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 293 RELEKKFSGK 322
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 7.0
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 125 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 292
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 293 RELEKKFSGK 322
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 31.5 bits (68), Expect = 7.0
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 125 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 292
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 293 RELEKKFSGK 322
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 31.5 bits (68), Expect = 7.0
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Frame = +2
Query: 104 DSFETSISQALVELETNSDLKAQLRELYI-TKAKEIELH-----NKKSIIIYVPMPKLKA 265
DSF+ ++ + D + R+L + T+ + +H +K + + V MPK K
Sbjct: 707 DSFDIQLTSVQLLYSRVGDNWREARKLSVSTQHILVPMHFNLELSKAMVFMDVRMPKFKI 766
Query: 266 FQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 445
+ K+ + +R +KK G + + +PKP T V+ K + +T TS+ + +
Sbjct: 767 YGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQIS 822
Query: 446 DLVFP 460
+ P
Sbjct: 823 QKIIP 827
>BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein.
Length = 440
Score = 31.1 bits (67), Expect = 9.3
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +2
Query: 80 LKAXGAEADSFETSISQALVEL-ETNSDLKAQLRELYITKAKEIE--LHNK-KSI-IIYV 244
LK E D+ + Q L E E + K +L + Y + E+E H K K I +I+
Sbjct: 85 LKKQDQEKDNMIEKLKQQLNETKEKAQEEKDKLEQKYTRQINELEGQFHQKAKEIGMIHT 144
Query: 245 PMPKLKAFQKIQIRLVRELE 304
+ ++ FQK +I++ REL+
Sbjct: 145 ELKAVRQFQKRKIQVERELD 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,629,529
Number of Sequences: 237096
Number of extensions: 2193883
Number of successful extensions: 4334
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4328
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18935903120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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