Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_P10.2
(1257 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 290 6e-77
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 228 1e-70
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 244 3e-63
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 186 1e-45
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 153 9e-36
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 152 2e-35
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 150 9e-35
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 138 4e-31
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 134 6e-30
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 129 2e-28
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 127 5e-28
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 108 3e-22
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 97 1e-18
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 83 1e-14
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 79 2e-13
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 64 5e-09
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 64 7e-09
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 49 3e-04
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 49 3e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 9e-04
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 42 0.044
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 41 0.059
UniRef50_Q6F1G2 Cluster: Cytosine-specific methyltransferase; n=... 35 3.8
UniRef50_A5C914 Cluster: Putative uncharacterized protein; n=1; ... 35 3.8
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 34 8.9
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 290 bits (711), Expect = 6e-77
Identities = 136/235 (57%), Positives = 164/235 (69%)
Frame = +2
Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXX 451
P+ RL+VR SN D+T Q+A +R+ G +VCAA SH LP+YG+ VG
Sbjct: 47 PKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVA 106
Query: 452 XXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGA 631
E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGA
Sbjct: 107 RRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGA 166
Query: 632 VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKY 811
VDGGLN+PHS+KRFPGY AE+K FNA+VHRAHIFG HVA+YMRSLE++DE+SFKRQFS+Y
Sbjct: 167 VDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRY 226
Query: 812 IKLGVTADAIEAIYKKAHEAIRADPSHXXXXXXXXXXXXXRWNKRKLTLAERKTE 976
IKLG+ AD +E IYKKAH+AIR DP+H RWN +KLT +RKT+
Sbjct: 227 IKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTK 281
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 228 bits (558), Expect(2) = 1e-70
Identities = 112/164 (68%), Positives = 124/164 (75%), Gaps = 1/164 (0%)
Frame = +2
Query: 518 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 697
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDAESK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 698 KFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIR 877
FNAE HRAHIFG HVA+YM +LE +D ++FKRQFS+YIKLG+ AD IE IYKKAH+AIR
Sbjct: 158 TFNAEAHRAHIFGQHVADYMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYKKAHDAIR 217
Query: 878 ADPSHXXXXXXXXXXXXXRWNKRKLTLAERKTE-SSKEGFFIKK 1006
ADPS RWN L AERK + K+ IKK
Sbjct: 218 ADPS-IKKVEKPEPAKKKRWNHVXLXHAERKXXIAQKKASXIKK 260
Score = 62.5 bits (145), Expect(2) = 1e-70
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +2
Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGV 397
P+ RL+VR SN D+TCQ+A SR+ G I+CAA SH LPRYGV
Sbjct: 47 PKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPRYGV 88
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 244 bits (598), Expect = 3e-63
Identities = 119/245 (48%), Positives = 157/245 (64%), Gaps = 1/245 (0%)
Frame = +2
Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXX 451
P+ R++VR +N D+ CQ+A +R+ G IVCAA +H LP+YGV VG
Sbjct: 47 PKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLA 106
Query: 452 XXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGA 631
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGA
Sbjct: 107 RRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGA 166
Query: 632 VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKY 811
VDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED++K+QFS+Y
Sbjct: 167 VDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQY 226
Query: 812 IKLGVTADAIEAIYKKAHEAIRADPSHXXXXXXXXXXXXXRWNKRKLTLAERKTE-SSKE 988
IK VT D +E +YKKAH AIR +P + RWN+ K++LA++K + K+
Sbjct: 227 IKNSVTPDMMEEMYKKAHAAIRENPVY--EKKPKKEVKKKRWNRPKMSLAQKKDRVAQKK 284
Query: 989 GFFIK 1003
F++
Sbjct: 285 ASFLR 289
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 186 bits (452), Expect = 1e-45
Identities = 100/234 (42%), Positives = 131/234 (55%), Gaps = 1/234 (0%)
Frame = +2
Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXX 451
P+ RL+VR +N DV Q+A S++ G +V +A SH LPRYG+ VG
Sbjct: 47 PKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLA 106
Query: 452 XXXXXXXXXXXXXXXXXXXXXXEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKG 628
+YNVE D P F+ LD+GLARTTTG+++F MKG
Sbjct: 107 RRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKG 164
Query: 629 AVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSK 808
DGG+NVPHS RF G+D ESK++NAE HR I G HVA+YM L+++DED +KRQFSK
Sbjct: 165 VADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSK 224
Query: 809 YIKLGVTADAIEAIYKKAHEAIRADPSHXXXXXXXXXXXXXRWNKRKLTLAERK 970
++ G+ AD + A Y+K H AIRAD S R ++LT ERK
Sbjct: 225 FLAAGLNADNLVATYQKVHSAIRADAS---PAAKKAAKPSKRHTAKRLTYDERK 275
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 153 bits (371), Expect = 9e-36
Identities = 76/207 (36%), Positives = 110/207 (53%)
Frame = +2
Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXX 451
P+ R +VR +N DV CQV + L G +CAA SH LP+YG+ G
Sbjct: 56 PKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCA 115
Query: 452 XXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGA 631
+Y+VE D F+C+LD GL RT+TGARVF A+KGA
Sbjct: 116 RRLLTKYGLADAYEGKTEDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGA 175
Query: 632 VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKY 811
VDGGL++PH+ KRF GYD + K + + +I G VAEY +++++ + F++ F+KY
Sbjct: 176 VDGGLDIPHNEKRFAGYDLQDKSHDPDTLERYIKGGVVAEYAEEMQEEEPEKFEQHFAKY 235
Query: 812 IKLGVTADAIEAIYKKAHEAIRADPSH 892
+ +E ++ EAIR DP+H
Sbjct: 236 LAEDFDPTELEDAMEEVFEAIREDPTH 262
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 152 bits (368), Expect = 2e-35
Identities = 84/215 (39%), Positives = 115/215 (53%), Gaps = 9/215 (4%)
Frame = +2
Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXX 451
P+ RL+VR +N D+ Q+ +++ G +V AA +H LP +G+ G
Sbjct: 70 PKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLA 129
Query: 452 XXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG------AFRCYLDVGLARTTTGARVF 613
V + G F+ LDVGLARTTTGARVF
Sbjct: 130 RRTLAKLGIADKFQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVF 189
Query: 614 GAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD---DED 784
G +KGAVDGG+ VPH RFPGY+ E +A+VHR IFG HVA+Y++ ++++ + D
Sbjct: 190 GVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKVHRDRIFGKHVADYLKQVKEEASSNPD 249
Query: 785 SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPS 889
QFSKY+ V ++IE +YKKAH AIRADPS
Sbjct: 250 EKCVQFSKYMAAKVLPESIEGMYKKAHAAIRADPS 284
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 150 bits (363), Expect = 9e-35
Identities = 80/199 (40%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Frame = +2
Query: 299 SNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXXXXXXXXXXX 478
+N V CQV SS L G + +A S L YGV VG
Sbjct: 5 TNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKL 64
Query: 479 XXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 658
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VPH
Sbjct: 65 DSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVPH 124
Query: 659 SIKRFPGYDAESKK---FNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVT 829
S KRFPGY + + ++A+ HR IFG HVA YM L+++D + +++QFS Y+K G+
Sbjct: 125 SEKRFPGYSVDEENNGTYDAQAHRDRIFGAHVASYMEYLKEEDPERYRKQFSAYLKHGLE 184
Query: 830 ADAIEAIYKKAHEAIRADP 886
+ A+E +Y KAHE IR +P
Sbjct: 185 SSALEDMYLKAHENIRKNP 203
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 138 bits (333), Expect = 4e-31
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 9/242 (3%)
Frame = +2
Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXX 451
P+ RL+ R +N + Q+ + L ++CAA S+ L R+GV G
Sbjct: 336 PKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLA 395
Query: 452 XXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGA 631
+NV+ F+ LD GL RTTTG RVFG +KGA
Sbjct: 396 RRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGA 455
Query: 632 VDGGLNVPHSIKRFPGY-----DAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKR 796
DGG+N+PHS RFPGY + ES K+ E H+A IFG H+ YM+ L+ ++F++
Sbjct: 456 CDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQSNEAFQK 515
Query: 797 QFSKYIKL--GVTADAIEAIYKKAHEAIRADPSH--XXXXXXXXXXXXXRWNKRKLTLAE 964
QFSK+ K D++E ++ K H IR +P ++ KLT A+
Sbjct: 516 QFSKWSKTLEAAKVDSVEKLFTKVHAEIRKNPERVKSTKKNDKPKRDHKKFYPTKLTAAQ 575
Query: 965 RK 970
RK
Sbjct: 576 RK 577
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 134 bits (323), Expect = 6e-30
Identities = 75/205 (36%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Frame = +2
Query: 281 RLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXXXXX 460
R +VR +N + CQ+ASS + G I+ A S L RYG+ VG
Sbjct: 50 RFIVRKTNNQIICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRF 109
Query: 461 XXXXXXXXXXXXXXXXXXXEYNVEPVDNGPG---AFRCYLDVGLARTTTGARVFGAMKGA 631
+ G + +LDVG+ RTTTG RVF A+KGA
Sbjct: 110 LKSLNLDNQFIGVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGA 169
Query: 632 VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKY 811
DGGLN+PH RFPG +FN E R +I G+HVAEYM S++++D D +K F+ Y
Sbjct: 170 CDGGLNIPHGNNRFPG---SKNEFNPEQLRKNILGIHVAEYMASMKEEDMDKYKAHFNDY 226
Query: 812 IKLGVTADAIEAIYKKAHEAIRADP 886
+K + + IE +Y AHE IR +P
Sbjct: 227 LKHKIDENNIEKMYLTAHEKIRKNP 251
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 129 bits (311), Expect = 2e-28
Identities = 79/215 (36%), Positives = 113/215 (52%), Gaps = 12/215 (5%)
Frame = +2
Query: 281 RLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXXXXX 460
RL+ R +N V Q+ + L G VC A S LP+YG+ +G
Sbjct: 49 RLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATGLLVARRF 108
Query: 461 XXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDG 640
EY + + P F+ LDVGLARTTTGA+VF MKGAVDG
Sbjct: 109 LTQMKLADVFKTEITE---EYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDG 163
Query: 641 GLNVPHSIKR----FPGYDAESKKFNAEV--------HRAHIFGLHVAEYMRSLEQDDED 784
GL +PH++ R F D ++ K +V ++ +I G VA+YMR L+++ E+
Sbjct: 164 GLFIPHNVCRLACKFDKKDKDAGKDRKDVPAEKIVKGNQYYILGGAVADYMRKLKKESEE 223
Query: 785 SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPS 889
+ +QFS+Y+K G+TAD++E IYK AH AIR +P+
Sbjct: 224 KYNKQFSRYVKAGITADSLEKIYKDAHAAIRKNPA 258
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 127 bits (307), Expect = 5e-28
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Frame = +2
Query: 281 RLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXXXXX 460
RL+VR + V CQ+ ++ + G ++ A S L RYG+ G
Sbjct: 44 RLVVRITGSRVICQIVAAYMDGDRVMVYADSRELERYGINFGATNYSAAYATGFLIGRRA 103
Query: 461 XXXXXXXXXXXXXXXXXXXEYNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVD 637
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D
Sbjct: 104 LTAMSLDEVYRPKEIDGT--YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASD 161
Query: 638 GGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIK 817
GLNVPHS +F G+ + F+A+ IFG +++EYM+ L D + +K QFS YIK
Sbjct: 162 AGLNVPHSAAKFYGHKPDG-SFDAKELHDRIFGYNISEYMKQLRDGDPEKYKTQFSSYIK 220
Query: 818 LGVTADAIEAIYKKAHEAIRADPS 889
G+ + I IYK A + I DP+
Sbjct: 221 KGIDPEEIPRIYKSAFDKIAEDPT 244
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 108 bits (260), Expect = 3e-22
Identities = 51/91 (56%), Positives = 68/91 (74%)
Frame = +2
Query: 578 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 757
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV+ I G +V +YM
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMGQNVVDYM 130
Query: 758 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAI 850
L ++DED++K+Q +YIK +T D +E I
Sbjct: 131 CFLMEEDEDAYKKQSLEYIKNNITPDMMEEI 161
Score = 36.7 bits (81), Expect = 1.3
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 284 LLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVG 406
++V +N + CQ+A + IVCAA +H LP+ GV VG
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVG 41
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 96.7 bits (230), Expect = 1e-18
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Frame = +2
Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXX 451
P+ R +VR +N + CQV + L G +V AA S L R+G+ G
Sbjct: 47 PKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLA 106
Query: 452 XXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGA 631
+ N++ P F LD+GL R+T G RVF A+KGA
Sbjct: 107 RRTLKTLKMDKFYEGNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGA 161
Query: 632 VDGGLNVPHSIKRFPGYDAES---KKFNAEVHRAHIFGLHVAEYMRSLEQD 775
DGG+++PH+ +RFPG+ ++ +K++A VH+ IFG+HV +YM L+++
Sbjct: 162 ADGGIHIPHNNRRFPGFSVDNDKKEKYDANVHKDRIFGVHVDKYMALLQKE 212
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 83.4 bits (197), Expect = 1e-14
Identities = 42/96 (43%), Positives = 57/96 (59%)
Frame = +2
Query: 689 ESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHE 868
+SK+ +AEVHR +I+G HVA YM L +D+ + ++ FS YIK + D IE +YKK H
Sbjct: 4 DSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHA 63
Query: 869 AIRADPSHXXXXXXXXXXXXXRWNKRKLTLAERKTE 976
AIR DPS R+N +KLT ERK +
Sbjct: 64 AIRPDPS-PKKSQKQPPKTHKRYNLKKLTYEERKAK 98
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 79.0 bits (186), Expect = 2e-13
Identities = 36/84 (42%), Positives = 58/84 (69%)
Frame = +2
Query: 518 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 697
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 698 KFNAEVHRAHIFGLHVAEYMRSLE 769
+ +A+VHR I+G +V+ Y+ +L+
Sbjct: 102 QLDAKVHRKSIYGGYVSAYIETLK 125
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 64.5 bits (150), Expect = 5e-09
Identities = 34/114 (29%), Positives = 62/114 (54%)
Frame = +2
Query: 551 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHI 730
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG ++ E
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG----DERVRCE------ 147
Query: 731 FGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSH 892
H+A++ +L++++ + ++RQFS+Y+ G+ + + ++ +AI H
Sbjct: 148 ---HIAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAIEEAYKH 198
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 64.1 bits (149), Expect = 7e-09
Identities = 30/97 (30%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +2
Query: 569 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNA-EVHRAHIFGLHV 745
+D+GL R T G + F +MKG+VD G+N+PH+ + + ++ + ++ E+ G+H+
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKI--FKVKNNEIDSKELFNERSKGIHI 189
Query: 746 AEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYK 856
+Y+ L+ +DE+ K+QFS + ++ D++ I K
Sbjct: 190 IKYIDLLKNEDEEKLKKQFS---NIFLSRDSLSTIKK 223
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 48.8 bits (111), Expect = 3e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 569 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 676
LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 48.8 bits (111), Expect = 3e-04
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Frame = +2
Query: 569 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVA 748
LD+G+ + G +++ +KGA+D GL +PH+ P + I G H+A
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP-------------EDSRIRGEHIA 149
Query: 749 EYMRSLEQDDEDSFKRQFSKYIKLGVTADAI----EAIYKKAHEA 871
+Y S++ D++++ +F+ YI+ G++ + I E++ K EA
Sbjct: 150 QYAESMDDDEKNA---KFANYIRCGLSPEEIPDHFESVKNKIDEA 191
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 9e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +2
Query: 551 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 676
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 41.5 bits (93), Expect = 0.044
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 551 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 661
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.1 bits (92), Expect = 0.059
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 569 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 676
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_Q6F1G2 Cluster: Cytosine-specific methyltransferase; n=2;
Entomoplasmatales|Rep: Cytosine-specific
methyltransferase - Mesoplasma florum (Acholeplasma
florum)
Length = 455
Score = 35.1 bits (77), Expect = 3.8
Identities = 29/109 (26%), Positives = 41/109 (37%)
Frame = +2
Query: 680 YDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKK 859
Y E+ K+ +R +F L V + + +D KR K K IYKK
Sbjct: 217 YVLEANKYGCPQNRKRVFALSVRKDVTKEFKDTFLESKRTSIKEEKTPFDISKEIGIYKK 276
Query: 860 AHEAIRADPSHXXXXXXXXXXXXXRWNKRKLTLAERKTESSKEGFFIKK 1006
HE +R D S R + RK K S++E I+K
Sbjct: 277 THELLREDYSIEKYKNEAINAIPNRTDSRKRIFLNNKMLSTQENTNIEK 325
>UniRef50_A5C914 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 309
Score = 35.1 bits (77), Expect = 3.8
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +2
Query: 668 RFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDE------DSFKRQFSKYIKLGVT 829
RF ++ + K+ +++VH H+ HVA Y+ L +D+ +F+ F Y +G+
Sbjct: 129 RFAEFNKDGKQLDSDVHLKHVRDGHVAAYVVILMKDNSLSIEGYHTFRGGFWNYFSMGMD 188
Query: 830 ADAIEAIYK 856
A A A +K
Sbjct: 189 ARASYAFHK 197
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 33.9 bits (74), Expect = 8.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 551 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 676
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,003,240
Number of Sequences: 1657284
Number of extensions: 12428048
Number of successful extensions: 30079
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 28613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30045
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 127555079085
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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