Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P10.2
         (1257 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   265   2e-72
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   8.1  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  265 bits (650), Expect = 2e-72
 Identities = 130/238 (54%), Positives = 152/238 (63%)
 Frame = +2

Query: 272 PQSRLLVRXSNXDVTCQVASSRLXGAHIVCAAXSHXLPRYGVXVGXXXXXXXXXXXXXXX 451
           P+ RL+VR SN D+TCQ+A  R+ G  IVCAA SH LPRYGV VG               
Sbjct: 47  PKFRLIVRLSNRDITCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVA 106

Query: 452 XXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGA 631
                                 EY VEPVD GP AFRCYLDVGLARTTTG+RVFGAMKGA
Sbjct: 107 RRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGA 166

Query: 632 VDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKY 811
           VDGGLN+PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YMR+LE++DE++FKRQFSKY
Sbjct: 167 VDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKY 226

Query: 812 IKLGVTADAIEAIYKKAHEAIRADPSHXXXXXXXXXXXXXRWNKRKLTLAERKTESSK 985
           I LG+ AD IE IYK AH +IR  P               RW   +   A R++ S++
Sbjct: 227 ISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTR 284


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +2

Query: 842 EAIYKKAHEAIRADPSH 892
           +++Y+K  + +R DP+H
Sbjct: 238 DSVYRKVRDTVRDDPAH 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,603
Number of Sequences: 2352
Number of extensions: 13670
Number of successful extensions: 31
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 143878944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)