Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_P07.2
(1299 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 37 0.027
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 0.21
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 0.21
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 32 1.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 25 2.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 25 2.1
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 2.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 2.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 2.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 2.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 3.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 3.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 3.1
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 26 3.4
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 30 4.1
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 30 4.1
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 30 4.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 25 6.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 7.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 7.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 25 7.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 9.5
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 9.5
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 9.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 24 9.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 24 9.5
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 25 9.9
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 37.1 bits (82), Expect = 0.027
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = +3
Query: 693 GGGGXXXGXXXXXXGXXXKXPGASXGXXTXXKKXXXXFPPXXXGGGDXXXGXGDXXXGGX 872
GGGG G G G G + PP GGGD G GG
Sbjct: 110 GGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGG 169
Query: 873 XXXXXGGGG 899
GGGG
Sbjct: 170 GRGGGGGGG 178
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect(2) = 0.21
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -3
Query: 406 PPPPPPPL---XXXXXTPPLRYPFXXPXXWXPXTXXXSP 299
PPPPPP + PP RYP P + P P
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
Score = 24.2 bits (50), Expect(2) = 0.21
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 412 YXPPPPPPP 386
+ PPPPPPP
Sbjct: 306 WPPPPPPPP 314
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect(2) = 0.21
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -3
Query: 406 PPPPPPPL---XXXXXTPPLRYPFXXPXXWXPXTXXXSP 299
PPPPPP + PP RYP P + P P
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
Score = 24.2 bits (50), Expect(2) = 0.21
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 412 YXPPPPPPP 386
+ PPPPPPP
Sbjct: 296 WPPPPPPPP 304
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 31.9 bits (69), Expect = 1.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 898 PPPPXXXXXXPPXFXSPXPXXXSPPP 821
PPPP PP F P P PPP
Sbjct: 40 PPPPWHRNRGPPPFGPPPPWDRPPPP 65
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.3
Identities = 49/220 (22%), Positives = 50/220 (22%)
Frame = +2
Query: 251 GGGKKKXXEKXDXXGKRGXXGGXGXPXXXXXEGVTQGGGXXXXAEXXXXXXXXIXXXKXG 430
GGG G G GG G G GGG G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Query: 431 XGGKRGXGXGGGXVLPLXKNXXXXXGGGXXGXXXPXXGXXXXXKXGGSPXKKXGXKXXQG 610
G G G GGG GGG G G GG G G
Sbjct: 151 SSGGCGGGGGGGC---------GGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGG 201
Query: 611 XXKEKXXXGGPX*KXARXXGGXKKXTXGGGGXXARXXXXXPXXXXKXPGGVXXXXXXXKK 790
GG + GG GGGG GG
Sbjct: 202 YAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGG---GSGGYATGGSSGGGYSSGG 258
Query: 791 KXXRXPPXXXGGGXXXXXXGGXKXXGXXXXPXGGGGXKXP 910
GGG GG G GGGG P
Sbjct: 259 SSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAP 298
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +3
Query: 693 GGGGXXXGXXXXXXGXXXKXPGASXGXXTXXKKXXXXFPPXXXGGGDXXXGXGDXXXGGX 872
GGGG G G P G + GGG G G GG
Sbjct: 165 GGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGG-GCGGGGSSGGGGY 223
Query: 873 XXXXXGGGGXXXXG 914
GGGG G
Sbjct: 224 ASAPSGGGGYATSG 237
Score = 28.7 bits (61), Expect = 9.5
Identities = 25/96 (26%), Positives = 25/96 (26%), Gaps = 2/96 (2%)
Frame = +3
Query: 693 GGGGXXXGXXXXXXGXXXKXPGASXGXXTXXKKXXXXFPPXXX--GGGDXXXGXGDXXXG 866
GGGG G G G S G GGG G G G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGG 179
Query: 867 GXXXXXXGGGGXXXXGXPXGXXXXVXXXXXXXXXGG 974
G GGGG G G V GG
Sbjct: 180 GYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGG 215
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.3
Identities = 49/220 (22%), Positives = 50/220 (22%)
Frame = +2
Query: 251 GGGKKKXXEKXDXXGKRGXXGGXGXPXXXXXEGVTQGGGXXXXAEXXXXXXXXIXXXKXG 430
GGG G G GG G G GGG G
Sbjct: 91 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGG 150
Query: 431 XGGKRGXGXGGGXVLPLXKNXXXXXGGGXXGXXXPXXGXXXXXKXGGSPXKKXGXKXXQG 610
G G G GGG GGG G G GG G G
Sbjct: 151 SSGGCGGGGGGGC---------GGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGG 201
Query: 611 XXKEKXXXGGPX*KXARXXGGXKKXTXGGGGXXARXXXXXPXXXXKXPGGVXXXXXXXKK 790
GG + GG GGGG GG
Sbjct: 202 YAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGG---GSGGYATGGSSGGGYSSGG 258
Query: 791 KXXRXPPXXXGGGXXXXXXGGXKXXGXXXXPXGGGGXKXP 910
GGG GG G GGGG P
Sbjct: 259 SSGGGYSTGGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAP 298
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = +3
Query: 693 GGGGXXXGXXXXXXGXXXKXPGASXGXXTXXKKXXXXFPPXXXGGGDXXXGXGDXXXGGX 872
GGGG G G P G + GGG G G GG
Sbjct: 165 GGGGGGCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGG-GCGGGGSSGGGGY 223
Query: 873 XXXXXGGGGXXXXG 914
GGGG G
Sbjct: 224 ASAPSGGGGYATSG 237
Score = 28.7 bits (61), Expect = 9.5
Identities = 25/96 (26%), Positives = 25/96 (26%), Gaps = 2/96 (2%)
Frame = +3
Query: 693 GGGGXXXGXXXXXXGXXXKXPGASXGXXTXXKKXXXXFPPXXX--GGGDXXXGXGDXXXG 866
GGGG G G G S G GGG G G G
Sbjct: 120 GGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGG 179
Query: 867 GXXXXXXGGGGXXXXGXPXGXXXXVXXXXXXXXXGG 974
G GGGG G G V GG
Sbjct: 180 GYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGG 215
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -3
Query: 925 PXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPP 821
P P F PPPP PP P P P P
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRP 91
Score = 29.9 bits (64), Expect = 4.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 406 PPPPPPPLXXXXXTPPLRYP 347
PPPPPPP+ PP+ P
Sbjct: 72 PPPPPPPMPCPPPPPPMPRP 91
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 412 YXPPPPPPP 386
+ PPPPPPP
Sbjct: 672 FMPPPPPPP 680
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 406 PPPPPPPL 383
PPPPPPP+
Sbjct: 675 PPPPPPPM 682
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 412 YXPPPPPPP 386
+ PPPPPPP
Sbjct: 672 FMPPPPPPP 680
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 406 PPPPPPPL 383
PPPPPPP+
Sbjct: 675 PPPPPPPM 682
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/88 (25%), Positives = 25/88 (28%)
Frame = +3
Query: 822 GGGDXXXGXGDXXXGGXXXXXXGGGGXXXXGXPXGXXXXVXXXXXXXXXGGXKKTXXXGG 1001
GGG G G+ GG GGGG G G GG + GG
Sbjct: 60 GGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGGGG 119
Query: 1002 XXXXXXXXXXXXXXXXGGKKXKXXXGGG 1085
GG + GGG
Sbjct: 120 GFNFNDIGGLINSMGGGGGGGQRQGGGG 147
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = -3
Query: 973 PPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXS--PXPXXXSPPPXXXG 809
PP P P PPPP PP S P P SPPP G
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 924 PXXXXGXFXPPPPXGXXXXPXXXXPPXXXXXXPPPXXXGG 805
P G PPP G P PP PPP GG
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = -3
Query: 1000 PPXXXVFFXPPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPP 821
PP PP P P PPPP PP P S PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 820 XXXGG 806
GG
Sbjct: 315 PQAGG 319
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 1000 PPXXXVFFXPPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPP 821
PP PP P P PPPP PP SP P PPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = -3
Query: 973 PPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXS--PXPXXXSPPPXXXG 809
PP P P PPPP PP S P P SPPP G
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 924 PXXXXGXFXPPPPXGXXXXPXXXXPPXXXXXXPPPXXXGG 805
P G PPP G P PP PPP GG
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = -3
Query: 1000 PPXXXVFFXPPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPP 821
PP PP P P PPPP PP P S PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 820 XXXGG 806
GG
Sbjct: 336 PQAGG 340
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 1000 PPXXXVFFXPPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPP 821
PP PP P P PPPP PP SP P PPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = -3
Query: 973 PPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXS--PXPXXXSPPPXXXG 809
PP P P PPPP PP S P P SPPP G
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 924 PXXXXGXFXPPPPXGXXXXPXXXXPPXXXXXXPPPXXXGG 805
P G PPP G P PP PPP GG
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/65 (27%), Positives = 18/65 (27%)
Frame = -3
Query: 1000 PPXXXVFFXPPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPP 821
PP PP P P PPPP PP P S PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 820 XXXGG 806
GG
Sbjct: 321 PQAGG 325
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 1000 PPXXXVFFXPPXXXXXXXXXTXXXXPXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPP 821
PP PP P P PPPP PP SP P PPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP---PPPP 309
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 924 PXXXXGXFXPPPPXGXXXXPXXXXPPXXXXXXPPPXXXGG 805
P G PPPP G P PP PPP G
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 924 PXXXXGXFXPPPPXGXXXXPXXXXPPXXXXXXPPPXXXGG 805
P G PPPP G P PP PPP G
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 924 PXXXXGXFXPPPPXGXXXXPXXXXPPXXXXXXPPPXXXGG 805
P G PPPP G P PP PPP G
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 26.2 bits (55), Expect(2) = 3.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 412 YXPPPPPPP 386
Y PPPPPPP
Sbjct: 591 YIPPPPPPP 599
Score = 22.2 bits (45), Expect(2) = 3.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 406 PPPPPPPLXXXXXTP 362
PPPPPP TP
Sbjct: 594 PPPPPPAEIIHVATP 608
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 336 GXXKG*RKGGVXXXXXRGGGGGGGXY 413
G G R+GG R GGGGGG Y
Sbjct: 619 GGFSGPRRGGFNSGMNRQGGGGGGFY 644
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 336 GXXKG*RKGGVXXXXXRGGGGGGGXY 413
G G R+GG R GGGGGG Y
Sbjct: 603 GGFSGPRRGGFNSGMNRQGGGGGGFY 628
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 336 GXXKG*RKGGVXXXXXRGGGGGGGXY 413
G G R+GG R GGGGGG Y
Sbjct: 600 GGFSGPRRGGFNSGMNRQGGGGGGFY 625
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 5.4
Identities = 21/78 (26%), Positives = 22/78 (28%)
Frame = +3
Query: 693 GGGGXXXGXXXXXXGXXXKXPGASXGXXTXXKKXXXXFPPXXXGGGDXXXGXGDXXXGGX 872
GGGG G G P + G GGG G G GG
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGG 153
Query: 873 XXXXXGGGGXXXXGXPXG 926
GGGG G G
Sbjct: 154 GGCGGGGGGCGGGGGGCG 171
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 25.4 bits (53), Expect(2) = 6.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 406 PPPPPPPL 383
PPPPPPPL
Sbjct: 154 PPPPPPPL 161
Score = 22.2 bits (45), Expect(2) = 6.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 412 YXPPPPPPP 386
Y P PPPPP
Sbjct: 150 YDPLPPPPP 158
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 925 PXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPPXXXG 809
P G P F PPPP P + P +PPP G
Sbjct: 426 PQGGPGGFGPPPPGGPGAYGPP-PTGFPPVGAPPPGAAG 463
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = -1
Query: 591 PXFXSGDPPFFXIXXXPXXGXXXPXXPPPXXXXXFFXRGXTXPPPXPXPLF--PPXP 427
P S PP G P PPP G PPP P P+ PP P
Sbjct: 536 PPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 25.4 bits (53), Expect(2) = 7.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 406 PPPPPPPL 383
PPPPPPPL
Sbjct: 69 PPPPPPPL 76
Score = 21.8 bits (44), Expect(2) = 7.6
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 403 PPPPPPLXXXXXTPPLRYPFXXP 335
PPPPP L + L+ P P
Sbjct: 98 PPPPPILGLKTPSKSLKTPTPRP 120
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 925 PXGXPXXFXPPPPXXXXXXPPXFXSPXPXXXSPPP 821
P P F PPPP PP P P PPP
Sbjct: 48 PPICPPQFCPPPPMCPPPPPP---PPPPMCPPPPP 79
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.7 bits (61), Expect = 9.5
Identities = 26/92 (28%), Positives = 28/92 (30%)
Frame = +2
Query: 248 GGGGKKKXXEKXDXXGKRGXXGGXGXPXXXXXEGVTQGGGXXXXAEXXXXXXXXIXXXKX 427
GGGG G G GG G G QGGG
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGG-NQGGGGGGGFNFNDIGGLINSMGGG 111
Query: 428 GXGGKRGXGXGGGXVLPLXKNXXXXXGGGXXG 523
G GG+R G GGG + GGG G
Sbjct: 112 GGGGQR-QGGGGGGFGDILGGIGSLIGGGGGG 142
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 406 PPPPPPPLXXXXXTPPLRYP 347
PPPPPPP P +YP
Sbjct: 86 PPPPPPPQPAPAQAPAPKYP 105
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 23.8 bits (49), Expect(2) = 9.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 406 PPPPPPP 386
PPPPPPP
Sbjct: 770 PPPPPPP 776
Score = 23.0 bits (47), Expect(2) = 9.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 400 PPPPPLXXXXXTPP 359
PPPPPL PP
Sbjct: 790 PPPPPLGIIPPPPP 803
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 23.8 bits (49), Expect(2) = 9.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 406 PPPPPPP 386
PPPPPPP
Sbjct: 770 PPPPPPP 776
Score = 23.0 bits (47), Expect(2) = 9.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 400 PPPPPLXXXXXTPP 359
PPPPPL PP
Sbjct: 790 PPPPPLGIIPPPPP 803
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 25.4 bits (53), Expect(2) = 9.9
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 384 RGGGGGGGXY 413
RGGGGGGG Y
Sbjct: 785 RGGGGGGGGY 794
Score = 21.4 bits (43), Expect(2) = 9.9
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 336 GXXKG*RKGGVXXXXXRGGGGGGG 407
G G +G GGGGGGG
Sbjct: 770 GGGGGGYRGNSYDDRRGGGGGGGG 793
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.149 0.474
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,208,010
Number of Sequences: 27780
Number of extensions: 340287
Number of successful extensions: 2974
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2035
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3621523944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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