Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_P04.2
(1215 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2; Cryptos... 64 7e-09
UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1; B... 62 3e-08
UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative... 62 4e-08
UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n... 60 2e-07
UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55; Euka... 57 8e-07
UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62; Fungi/... 56 1e-06
UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5; ... 54 1e-05
UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29; Euka... 54 1e-05
UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n... 52 3e-05
UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3; ... 51 7e-05
UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, wh... 44 0.008
UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4; Thermo... 42 0.043
UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1; Encepha... 41 0.074
UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1; A... 40 0.13
UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=... 39 0.23
UniRef50_Q6LZK0 Cluster: Ribosomal protein L34e; n=5; Methanococ... 38 0.40
UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3; ... 36 2.1
UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3; Methan... 36 2.1
>UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L34 -
Cryptosporidium parvum Iowa II
Length = 138
Score = 64.1 bits (149), Expect = 7e-09
Identities = 31/79 (39%), Positives = 38/79 (48%)
Frame = +1
Query: 136 VXPPGGXXXXXXXXXXXXXXXCGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCH 315
V PGG CG CK+ L G+P P L R+ TV R GG C
Sbjct: 26 VKTPGGRNLIQNIGKVYSRPKCGDCKKPLAGIPACAPYEMKHLKKRERTVARAYGGTKCP 85
Query: 316 XCVKQRIVSAFLIXAQKIV 372
CV+QRI+ AFL+ QK+V
Sbjct: 86 TCVRQRILRAFLLEEQKVV 104
>UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L34, putative -
Babesia bovis
Length = 157
Score = 62.1 bits (144), Expect = 3e-08
Identities = 32/77 (41%), Positives = 35/77 (45%)
Frame = +1
Query: 136 VXPPGGXXXXXXXXXXXXXXXCGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCH 315
V PGG CG CK L G+P RP L R+ V R GGV CH
Sbjct: 23 VKTPGGRLVVQRRVKVAQGPKCGDCKCKLAGIPALRPHLYRNLKKRERRVSRAYGGVRCH 82
Query: 316 XCVKQRIVSAFLIXAQK 366
CVK RI+ AFL QK
Sbjct: 83 KCVKDRIIRAFLKEEQK 99
>UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative;
n=10; Eukaryota|Rep: Ribosomal protein L34 protein,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 192
Score = 61.7 bits (143), Expect = 4e-08
Identities = 33/79 (41%), Positives = 37/79 (46%)
Frame = +1
Query: 136 VXPPGGXXXXXXXXXXXXXXXCGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCH 315
+ PGG CG C L G+P RP S++ K TV R GG C
Sbjct: 99 IKTPGGELRYLHIKKKGTAPKCGDCGIKLPGIPALRPREYSQISRPKKTVSRAYGGSRCA 158
Query: 316 XCVKQRIVSAFLIXAQKIV 372
CVK RIV AFLI QKIV
Sbjct: 159 GCVKDRIVRAFLIEEQKIV 177
>UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n=4;
Eukaryota|Rep: 60S ribosomal protein L34a, putative -
Theileria parva
Length = 138
Score = 59.7 bits (138), Expect = 2e-07
Identities = 29/58 (50%), Positives = 31/58 (53%)
Frame = +1
Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
CG CKR L G+ RP L R TV R GG CH CVK RI+ AFL QK V
Sbjct: 44 CGDCKRTLAGVSAVRPFLYKNLKRRNRTVSRPYGGSRCHNCVKDRIIRAFLKEEQKCV 101
>UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55;
Eukaryota|Rep: 60S ribosomal protein L34-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 121
Score = 57.2 bits (132), Expect = 8e-07
Identities = 30/79 (37%), Positives = 36/79 (45%)
Frame = +1
Query: 136 VXPPGGXXXXXXXXXXXXXXXCGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCH 315
V PGG CG C L+G+ RP + + TV R GG C
Sbjct: 23 VKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQYATVSKTHKTVSRAYGGSRCA 82
Query: 316 XCVKQRIVSAFLIXAQKIV 372
CVK+RI+ AFLI QKIV
Sbjct: 83 NCVKERIIRAFLIEEQKIV 101
>UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62;
Fungi/Metazoa group|Rep: 60S ribosomal protein L34 -
Homo sapiens (Human)
Length = 117
Score = 56.4 bits (130), Expect = 1e-06
Identities = 28/58 (48%), Positives = 31/58 (53%)
Frame = +1
Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
CG C LRG+ RP RL K V R GG +C CV+ RI AFLI QKIV
Sbjct: 46 CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIV 103
>UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L34e, putative -
Plasmodium yoelii yoelii
Length = 164
Score = 53.6 bits (123), Expect = 1e-05
Identities = 26/79 (32%), Positives = 34/79 (43%)
Frame = +1
Query: 136 VXPPGGXXXXXXXXXXXXXXXCGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCH 315
+ PGG C CK ++G+ RPA R + V R GG +C
Sbjct: 23 IRTPGGKLTIHVIKKKAGKPKCADCKNPIQGVKALRPADNQRARKKDRKVSRAYGGSICA 82
Query: 316 XCVKQRIVSAFLIXAQKIV 372
C K+RI+ AFL QK V
Sbjct: 83 KCXKERIMRAFLFEEQKCV 101
>UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29;
Eukaryota|Rep: 60S ribosomal protein L34-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 120
Score = 53.6 bits (123), Expect = 1e-05
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 136 VXPPGGXXXXXXXXXXXXXXXCGXCKRXLRGLPPARPAA--RSRLCSRKHTVQRVXGGVL 309
V PGG C + ++G+P RP+ RSRL + TV R GGVL
Sbjct: 23 VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVL 82
Query: 310 CHXCVKQRIVSAFLIXAQKIV 372
V++RI+ AFL+ QKIV
Sbjct: 83 SGSAVRERIIRAFLVEEQKIV 103
>UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L34e - Antonospora locustae (Nosema locustae)
Length = 113
Score = 52.0 bits (119), Expect = 3e-05
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
C C+ LRG+ RPAA +RL + TV R GG LC C++ RI+ AFL ++++
Sbjct: 44 CVKCRSKLRGIDICRPAAFARLRKSQRTVARTYGGNLCGSCLENRILDAFLSAEEQLL 101
>UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L34 - Entamoeba histolytica HM-1:IMSS
Length = 137
Score = 50.8 bits (116), Expect = 7e-05
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +1
Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
CG C L G+ RP L K TV R GGV CH CV+++I+ AFLI ++
Sbjct: 44 CGDCGCVLAGIRHIRPHQYGWLGKSKRTVTRAYGGVRCHKCVQKKILRAFLINEHNLI 101
>UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 108
Score = 44.0 bits (99), Expect = 0.008
Identities = 23/51 (45%), Positives = 28/51 (54%)
Frame = +1
Query: 220 LRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
L GL RP +L R+ TV R GGVL +K RI+ AFL+ KIV
Sbjct: 53 LNGLKRIRPTKLKQLARRQRTVSRPYGGVLSAGALKNRIIRAFLVEEVKIV 103
>UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L34e - Aeropyrum
pernix
Length = 95
Score = 41.5 bits (93), Expect = 0.043
Identities = 22/67 (32%), Positives = 26/67 (38%)
Frame = +1
Query: 145 PGGXXXXXXXXXXXXXXXCGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCV 324
PGG C C R L G+P RP RL +R GGVLC C+
Sbjct: 24 PGGSTVVHYERRKPGPARCARCGRPLGGVPRGRPPRVRRLSKTAKRPERPYGGVLCSTCL 83
Query: 325 KQRIVSA 345
+ I A
Sbjct: 84 AEMIFEA 90
>UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L34
- Encephalitozoon cuniculi
Length = 110
Score = 40.7 bits (91), Expect = 0.074
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +1
Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
C C L + RPA SR V R G C CV+++I+SAFL ++IV
Sbjct: 43 CHECNAILGSIARMRPAEFSRQKVSARRVNRPYGATTCGRCVREKIISAFLGNEERIV 100
>UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1;
Aedes aegypti|Rep: Ribosomal protein L34, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 123
Score = 39.9 bits (89), Expect = 0.13
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1
Query: 262 LCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIVXVL 381
+C TV R GGV+CH ++RI+ AFLI QK+V VL
Sbjct: 60 MCRCLKTVIRTFGGVICH---RERIIRAFLIDEQKVVKVL 96
>UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L34,
putative - Leishmania major
Length = 168
Score = 39.1 bits (87), Expect = 0.23
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +1
Query: 256 SRLCSR-KHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
+RL SR + +V R GGVL H V+ R+V AFL+ Q+IV
Sbjct: 65 ARLASRHEKSVSRAYGGVLSHDQVRDRVVRAFLVEEQRIV 104
>UniRef50_Q6LZK0 Cluster: Ribosomal protein L34e; n=5;
Methanococcus|Rep: Ribosomal protein L34e -
Methanococcus maripaludis
Length = 89
Score = 38.3 bits (85), Expect = 0.40
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVS 342
CG C L G+P R ++L + +R GG LC CVK+ +V+
Sbjct: 37 CGACGALLNGVPRGRAVEITKLAKTEKRPERPFGGNLCPKCVKKMMVA 84
>UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein L34e,
putative - Trichomonas vaginalis G3
Length = 116
Score = 35.9 bits (79), Expect = 2.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFL 351
C + + G+ + R+ + TV R GGV C VK RI++AF+
Sbjct: 45 CAETGKRINGIKCVKTCELRRMKKNQRTVSRPYGGVYCGAVVKDRIINAFM 95
>UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L34e -
Methanobacterium thermoautotrophicum
Length = 88
Score = 35.9 bits (79), Expect = 2.1
Identities = 18/66 (27%), Positives = 23/66 (34%)
Frame = +1
Query: 133 FVXPPGGXXXXXXXXXXXXXXXCGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLC 312
F PGG C C + L G+P RP +L K R GG C
Sbjct: 15 FKKTPGGRTVTHYRRKKPSKHVCAGCGKPLHGVPRGRPYEIRKLSKSKKRPNRPYGGYYC 74
Query: 313 HXCVKQ 330
C ++
Sbjct: 75 SSCARK 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,810,014
Number of Sequences: 1657284
Number of extensions: 4442785
Number of successful extensions: 6658
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6654
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 122791400986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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