Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P04.2
         (1215 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L38941-1|AAC41916.1|  117|Homo sapiens ribosomal protein L34 pro...    59   3e-08
CR542242-1|CAG47038.1|  117|Homo sapiens RPL34 protein.                56   2e-07
CR542232-1|CAG47028.1|  117|Homo sapiens RPL34 protein.                56   2e-07
BC106009-1|AAI06010.1|  117|Homo sapiens ribosomal protein L34 p...    56   2e-07
BC070208-1|AAH70208.1|  117|Homo sapiens ribosomal protein L34 p...    56   2e-07
BC001773-1|AAH01773.1|  117|Homo sapiens ribosomal protein L34 p...    56   2e-07
AB061832-1|BAB79470.1|  117|Homo sapiens ribosomal protein L34 p...    56   2e-07

>L38941-1|AAC41916.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 59.3 bits (137), Expect = 3e-08
 Identities = 28/58 (48%), Positives = 32/58 (55%)
 Frame = +1

Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
           CG C   LRG+ P RP    RL   K  V R  GG +C  CV+ RI  AFLI  QKI+
Sbjct: 46  CGVCPGKLRGVRPVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKII 103


>CR542242-1|CAG47038.1|  117|Homo sapiens RPL34 protein.
          Length = 117

 Score = 56.4 bits (130), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 31/58 (53%)
 Frame = +1

Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
           CG C   LRG+   RP    RL   K  V R  GG +C  CV+ RI  AFLI  QKIV
Sbjct: 46  CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIV 103


>CR542232-1|CAG47028.1|  117|Homo sapiens RPL34 protein.
          Length = 117

 Score = 56.4 bits (130), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 31/58 (53%)
 Frame = +1

Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
           CG C   LRG+   RP    RL   K  V R  GG +C  CV+ RI  AFLI  QKIV
Sbjct: 46  CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIV 103


>BC106009-1|AAI06010.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 56.4 bits (130), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 31/58 (53%)
 Frame = +1

Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
           CG C   LRG+   RP    RL   K  V R  GG +C  CV+ RI  AFLI  QKIV
Sbjct: 46  CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIV 103


>BC070208-1|AAH70208.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 56.4 bits (130), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 31/58 (53%)
 Frame = +1

Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
           CG C   LRG+   RP    RL   K  V R  GG +C  CV+ RI  AFLI  QKIV
Sbjct: 46  CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIV 103


>BC001773-1|AAH01773.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 56.4 bits (130), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 31/58 (53%)
 Frame = +1

Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
           CG C   LRG+   RP    RL   K  V R  GG +C  CV+ RI  AFLI  QKIV
Sbjct: 46  CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIV 103


>AB061832-1|BAB79470.1|  117|Homo sapiens ribosomal protein L34
           protein.
          Length = 117

 Score = 56.4 bits (130), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 31/58 (53%)
 Frame = +1

Query: 199 CGXCKRXLRGLPPARPAARSRLCSRKHTVQRVXGGVLCHXCVKQRIVSAFLIXAQKIV 372
           CG C   LRG+   RP    RL   K  V R  GG +C  CV+ RI  AFLI  QKIV
Sbjct: 46  CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIV 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,498,127
Number of Sequences: 237096
Number of extensions: 731191
Number of successful extensions: 856
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17174423760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)