Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P03.2
         (1261 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0699 - 24376987-24377154,24377259-24377406,24377530-243776...    66   7e-11
04_03_1020 - 21761297-21761555,21761630-21761739,21762402-217626...    29   7.7  

>01_05_0699 -
           24376987-24377154,24377259-24377406,24377530-24377645,
           24377743-24377925,24377998-24378186,24378273-24378497,
           24378514-24378759,24378836-24378983,24379126-24379241,
           24379441-24379497,24379735-24379923,24380001-24380150,
           24380323-24380404,24380484-24380601,24380713-24380899,
           24381044-24381138,24381223-24381277,24381376-24381567,
           24381657-24381853,24382534-24382684
          Length = 1003

 Score = 65.7 bits (153), Expect = 7e-11
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
 Frame = +1

Query: 262 FWHTLTEMKLEVDKLKETTKQIFGRFTYRC--DIGSVFEVDGTSF---NXTPHLEQQYHH 426
           FW  L  +KL+V    ++   I G +T R    I S+F +   S    +     ++    
Sbjct: 28  FWDALRRLKLDVLGTDDSPIPITGYYTPRQYEKIASLFRICPESILPPSANSFGDRNNCP 87

Query: 427 VMGTIMNKNTIEDFKSIDKASLLNSIGEMIWSNLRERTWITNPSALLNFFILSFADLKKF 606
           V GT++N N +  F+++D+A LL +  + I  +++      NP+ LL F ++SFADLK +
Sbjct: 88  VPGTLLNTNNMRGFQNLDRALLLKAEAKKILHDIKSGKVEENPALLLRFLVISFADLKNW 147

Query: 607 HYYYWFAFPA 636
             YY  AFP+
Sbjct: 148 KVYYNVAFPS 157


>04_03_1020 -
           21761297-21761555,21761630-21761739,21762402-21762635,
           21762710-21762817,21762910-21762969,21763549-21763624,
           21763710-21763870,21764485-21764547,21764657-21764744,
           21765062-21765592,21766344-21766783
          Length = 709

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 595 LKKFHYYYWFAFPAPSQPTVHMKGRSTKISDYFNN--KQLETLSQCYKSLEE 744
           L++F    W   P+P  PT      S  +S Y  N  +++ T+S  ++ + +
Sbjct: 645 LRQFKQSNWSCLPSPPHPTFSNGATSYNLSSYMMNETRRIPTISDTWQDISQ 696


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,631,243
Number of Sequences: 37544
Number of extensions: 395380
Number of successful extensions: 912
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3899283420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)