Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_P03.2
         (1261 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000091-1|AAH00091.1|  676|Homo sapiens ATG7 protein protein.        114   6e-25
AF094516-1|AAC69630.1|  703|Homo sapiens E1-like protein protein.     114   6e-25
BC107163-1|AAI07164.1|  551|Homo sapiens hypothetical protein FL...    32   3.8  
BC107162-1|AAI07163.1|  551|Homo sapiens hypothetical protein FL...    32   3.8  
BC046238-1|AAH46238.1| 1133|Homo sapiens polymerase (RNA) III (D...    32   5.1  
AY092084-1|AAM18214.1| 1133|Homo sapiens RNA polymerase III subu...    32   5.1  

>BC000091-1|AAH00091.1|  676|Homo sapiens ATG7 protein protein.
          Length = 676

 Score =  114 bits (275), Expect = 6e-25
 Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
 Frame = +1

Query: 223 IQYVPFSSFVHPSFWHTLTEMKLEVDKLKETTKQIFGRFTYRCDIGSV---FEVDGTSFN 393
           +Q+ PFSS +   FWH LT+ KL   +L E  K I G + Y  D   +     ++ ++F+
Sbjct: 13  LQFAPFSSALDVGFWHELTQKKLNEYRLDEAPKDIKGYY-YNGDSAGLPARLTLEFSAFD 71

Query: 394 XTPHLEQQYHHVMGTIMNKNTIEDFKSIDKASLLNSIGEMIWSNLRERTWITNPSALLNF 573
            +     +    +GT+ N NT+E FK+ DK  LL      IW +++  T + NP  L  F
Sbjct: 72  MSAPTPARCCPAIGTLYNTNTLESFKTADKKLLLEQAANEIWESIKSGTALENPVLLNKF 131

Query: 574 FILSFADLKKFHYYYWFAFPAPSQP-TVHMKGRSTKISDYFNNKQLETLSQCYKSL 738
            +L+FADLKK+H+YYWF +PA   P ++ +      +   F+ KQ+E L   Y +L
Sbjct: 132 LLLTFADLKKYHFYYWFCYPALCLPESLPLIQGPVGLDQRFSLKQIEALECAYDNL 187


>AF094516-1|AAC69630.1|  703|Homo sapiens E1-like protein protein.
          Length = 703

 Score =  114 bits (275), Expect = 6e-25
 Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
 Frame = +1

Query: 223 IQYVPFSSFVHPSFWHTLTEMKLEVDKLKETTKQIFGRFTYRCDIGSV---FEVDGTSFN 393
           +Q+ PFSS +   FWH LT+ KL   +L E  K I G + Y  D   +     ++ ++F+
Sbjct: 13  LQFAPFSSALDVGFWHELTQKKLNEYRLDEAPKDIKGYY-YNGDSAGLPARLTLEFSAFD 71

Query: 394 XTPHLEQQYHHVMGTIMNKNTIEDFKSIDKASLLNSIGEMIWSNLRERTWITNPSALLNF 573
            +     +    +GT+ N NT+E FK+ DK  LL      IW +++  T + NP  L  F
Sbjct: 72  MSAPTPARCCPAIGTLYNTNTLESFKTADKKLLLEQAANEIWESIKSGTALENPVLLNKF 131

Query: 574 FILSFADLKKFHYYYWFAFPAPSQP-TVHMKGRSTKISDYFNNKQLETLSQCYKSL 738
            +L+FADLKK+H+YYWF +PA   P ++ +      +   F+ KQ+E L   Y +L
Sbjct: 132 LLLTFADLKKYHFYYWFCYPALCLPESLPLIQGPVGLDQRFSLKQIEALECAYDNL 187


>BC107163-1|AAI07164.1|  551|Homo sapiens hypothetical protein
           FLJ13305 protein.
          Length = 551

 Score = 32.3 bits (70), Expect = 3.8
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = +1

Query: 640 SQPTVHMKGRSTKISDYFNNKQLETLSQCYKSLEENQK 753
           S   V  KG+S K+ +YFNN++ +++++  +S  E +K
Sbjct: 473 SDEFVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEK 510


>BC107162-1|AAI07163.1|  551|Homo sapiens hypothetical protein
           FLJ13305 protein.
          Length = 551

 Score = 32.3 bits (70), Expect = 3.8
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = +1

Query: 640 SQPTVHMKGRSTKISDYFNNKQLETLSQCYKSLEENQK 753
           S   V  KG+S K+ +YFNN++ +++++  +S  E +K
Sbjct: 473 SDEFVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEK 510


>BC046238-1|AAH46238.1| 1133|Homo sapiens polymerase (RNA) III (DNA
           directed) polypeptide B protein.
          Length = 1133

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
 Frame = +1

Query: 508 EMIWSNLRERTWITNPSALLNFFILSFADLKKFHYYYWFAFPAPSQPTVHMKGRSTKISD 687
           + +W    ++T I     LL   IL+   +K+F++     + A     V +     K+ D
Sbjct: 294 QRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDD 353

Query: 688 --YFNNKQLETLSQCYKSL-EENQKNFFVVIKKNDDLSVXK-LSXVFDV 822
             Y+ NK+LE   Q    L E+  K F   +KK  D  + K  +  FDV
Sbjct: 354 RDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDV 402


>AY092084-1|AAM18214.1| 1133|Homo sapiens RNA polymerase III subunit
           RPC2 protein.
          Length = 1133

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
 Frame = +1

Query: 508 EMIWSNLRERTWITNPSALLNFFILSFADLKKFHYYYWFAFPAPSQPTVHMKGRSTKISD 687
           + +W    ++T I     LL   IL+   +K+F++     + A     V +     K+ D
Sbjct: 294 QRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDD 353

Query: 688 --YFNNKQLETLSQCYKSL-EENQKNFFVVIKKNDDLSVXK-LSXVFDV 822
             Y+ NK+LE   Q    L E+  K F   +KK  D  + K  +  FDV
Sbjct: 354 RDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDV 402


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,956,619
Number of Sequences: 237096
Number of extensions: 2381412
Number of successful extensions: 7763
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7761
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18000117210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)