Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_O21.2
         (1295 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0946 - 29075600-29076229                                        134   1e-31
03_05_0694 + 26844075-26844217,26844417-26844489,26844577-268447...    29   8.0  

>03_05_0946 - 29075600-29076229
          Length = 209

 Score =  134 bits (324), Expect = 1e-31
 Identities = 77/192 (40%), Positives = 106/192 (55%), Gaps = 18/192 (9%)
 Frame = +2

Query: 203 SLXIVFXSLCTAFLGAGLTWVXVSSTEQSQKLKVEVERQXKKLXXRKEAH---------- 352
           SL +V  S  TA L   ++W+ +  T     L+  +ER  +KL   K             
Sbjct: 13  SLSVVAISGATAVLCEAISWLLIYRTATYNSLRATIERHSRKLDAMKAGASNSSSSSSAG 72

Query: 353 -GASLARQ-------QKXKIEXXXXXLKNNNRXLSLVKMKSMFAIGFAFTALLSMFNSIF 508
            GAS + Q       +  K++     LK+  R LSL K+KS   +      +  + NS+F
Sbjct: 73  AGASGSSQPAGSSSSRAKKMDRVETSLKDAARELSLSKLKSGAVVAAVLFVVFGLLNSLF 132

Query: 509 DGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRA 688
           +GR VAKLPF P+  +Q +SHR +PG+D TDCS +FLY LC++SIR N+QKLLGFAP RA
Sbjct: 133 EGRAVAKLPFAPVPLVQRMSHRGVPGNDPTDCSMVFLYFLCSISIRTNLQKLLGFAPPRA 192

Query: 689 ASKQGGALFAAP 724
           A+  GG LF  P
Sbjct: 193 AAAAGGGLFPMP 204


>03_05_0694 +
           26844075-26844217,26844417-26844489,26844577-26844781,
           26845516-26845655,26846858-26846983,26847455-26847622,
           26848486-26848650,26849433-26849594,26849682-26849761,
           26849975-26850038
          Length = 441

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/63 (22%), Positives = 29/63 (46%)
 Frame = +2

Query: 269 VSSTEQSQKLKVEVERQXKKLXXRKEAHGASLARQQKXKIEXXXXXLKNNNRXLSLVKMK 448
           +      Q  K +++ Q +K   RK+ HGAS+   +  +++     L +N     L   +
Sbjct: 305 IKDKHDEQDKKAQLKLQGEKAVKRKDYHGASIFYTEAIELDPTDATLYSNRSLCHLQMTE 364

Query: 449 SMF 457
           ++F
Sbjct: 365 ALF 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,448,174
Number of Sequences: 37544
Number of extensions: 354687
Number of successful extensions: 681
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4038959244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)