Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_O20.2
         (1302 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71259-5|CAA95796.1|  106|Caenorhabditis elegans Hypothetical pr...    72   8e-13
Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical pr...    52   1e-06
U40938-8|AAA81699.1|  123|Caenorhabditis elegans Hypothetical pr...    44   3e-04
Z11126-2|CAA77473.1|  197|Caenorhabditis elegans Hypothetical pr...    30   3.1  

>Z71259-5|CAA95796.1|  106|Caenorhabditis elegans Hypothetical
           protein F13G3.4 protein.
          Length = 106

 Score = 72.1 bits (169), Expect = 8e-13
 Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +1

Query: 256 TAYQHNNVNQWTSAVVESCLGQLTKLQKPYKYVVTCTILQ-KHGAGLHTSSSCYWDNTTD 432
           T Y H +  QW    VE    +L    KPYKYVVT + LQ   G+GL+ S+  YW+  TD
Sbjct: 24  TQYTHKDSVQWNQKAVEQITKKLVAAGKPYKYVVTSSFLQISSGSGLNVSTISYWNKVTD 83

Query: 433 GSCTVRWENKTMYCIVSV 486
            S   RWE KTM  IV V
Sbjct: 84  SSYMYRWEAKTMLAIVYV 101


>Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical
           protein T05C12.5 protein.
          Length = 168

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = +1

Query: 247 IGGTAYQHNNVNQWTSAVVESCLGQLTKLQKPYKYVVTCTILQK-HGAGLHTSSSCYWDN 423
           IG T Y    ++ W S ++++    L KL    K++V CTI  K     + T++ C WD 
Sbjct: 79  IGKTPYSPFKMSDWMSKMIQTISDNLVKLNGSKKFLVHCTISAKTDNLAICTANMCSWDT 138

Query: 424 TTDGSCTVRWENKTMYCIVSV 486
           T D +    W +KT++  V V
Sbjct: 139 TKDTAYYSEWMSKTIFGAVQV 159


>U40938-8|AAA81699.1|  123|Caenorhabditis elegans Hypothetical
           protein D1009.5 protein.
          Length = 123

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +1

Query: 256 TAYQHNNVNQWTSAVVESCLGQLTKLQKP-YKYVVTCTILQKHGAGLHTSSSCYWDNTTD 432
           T Y  +     +  +  S   +L  LQ P YKYV+   I ++ G G  T+  C WD   D
Sbjct: 40  TIYNVDEAELVSKDISASIRERLKGLQLPRYKYVIQTMIAEQCGNGATTAVQCVWDEDCD 99

Query: 433 GSCTVRWENKTMYCIVSV 486
           G  T R+   +++C V V
Sbjct: 100 GYLTQRYVTGSIWCEVLV 117


>Z11126-2|CAA77473.1|  197|Caenorhabditis elegans Hypothetical
           protein ZK643.2 protein.
          Length = 197

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -3

Query: 418 PNNKKNLYAVLHHASAVL---CRSLHICMVFVT*STAPDMTQQLLKS 287
           P + K+LY V    +A++   C +LH C V+VT        Q L++S
Sbjct: 107 PEDNKHLYVVHAEMNAIINKRCTTLHDCTVYVTLFPCNKCAQMLIQS 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,562,317
Number of Sequences: 27780
Number of extensions: 343154
Number of successful extensions: 583
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3631930622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)