Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_O19.2
         (1290 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0129 + 17520753-17520842,17521651-17521741,17521887-175220...    90   4e-18
05_03_0297 - 11911699-11911772,11911987-11912072,11912245-119123...    29   6.0  
03_02_0932 + 12495700-12495738,12495859-12496093,12496178-124964...    29   8.0  

>03_04_0129 +
           17520753-17520842,17521651-17521741,17521887-17522070,
           17522149-17522224
          Length = 146

 Score = 89.8 bits (213), Expect = 4e-18
 Identities = 37/83 (44%), Positives = 57/83 (68%)
 Frame = +3

Query: 225 WFSVRCAAILRHXYIRSPVGVKPVTKLFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 404
           W+  R A+I R  Y+R  +GV    K++GGR+RNG  P HFC+SSG+I+R  LQ L+ + 
Sbjct: 55  WYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMG 114

Query: 405 LVEXVQDGGRILTTQGXRALDRI 473
           +++    GGR++T+QG R LD++
Sbjct: 115 IIDVDPKGGRLITSQGRRDLDQV 137


>05_03_0297 -
           11911699-11911772,11911987-11912072,11912245-11912332,
           11912592-11912719,11913540-11913961,11931803-11932423
          Length = 472

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 149 KSXSLSHXXLVKPARFKALAPYAPVLVLCALCCHPSSXLHSLT 277
           K+  +SH  L+  A++  + P A ++V  A  C  ++ LH+ T
Sbjct: 369 KANKISHETLMGCAKYTTMQPQAILIVKLASLCRSTTFLHTKT 411


>03_02_0932 +
           12495700-12495738,12495859-12496093,12496178-12496423,
           12496519-12496572,12497329-12497589,12497750-12497802,
           12497893-12498016,12498147-12498401,12498798-12499888,
           12500001-12500007,12500316-12500445,12500617-12500731,
           12500783-12500853,12501246-12501354,12501550-12501738,
           12502519-12502644,12503048-12503563
          Length = 1206

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = +2

Query: 212 YAPVLVLCALCCHPSSXLHSLTCWSXACHQALWWAQT*WSYTFTFLQVIRQYCTQGFAIV 391
           +AP+ VL  L C  +  L+++  W+   +QAL        Y F FL+  R+Y   G+  +
Sbjct: 220 FAPI-VLAWLICMSALGLYNIIHWNPHVYQALNPC-----YMFKFLKKTRKY---GWMSL 270

Query: 392 GGIEAC 409
           GGI  C
Sbjct: 271 GGILLC 276


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,973,784
Number of Sequences: 37544
Number of extensions: 327495
Number of successful extensions: 725
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)