Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_O19.2
         (1290 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...   107   9e-23
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...   107   9e-23
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...   107   9e-23
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...   107   9e-23
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...   107   9e-23
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...   107   9e-23

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score =  107 bits (257), Expect = 9e-23
 Identities = 50/83 (60%), Positives = 60/83 (72%)
 Frame = +3

Query: 225 WFSVRCAAILRHXYIRSPVGVKPVTKLFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 404
           WF  R A+  RH Y+R   GV  +TK++GGR+RNGV PSHF R S S+AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 405 LVEXVQDGGRILTTQGXRALDRI 473
           +VE  QDGGR LT QG R LDRI
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDRI 134


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  107 bits (257), Expect = 9e-23
 Identities = 50/83 (60%), Positives = 60/83 (72%)
 Frame = +3

Query: 225 WFSVRCAAILRHXYIRSPVGVKPVTKLFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 404
           WF  R A+  RH Y+R   GV  +TK++GGR+RNGV PSHF R S S+AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 405 LVEXVQDGGRILTTQGXRALDRI 473
           +VE  QDGGR LT QG R LDRI
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDRI 134


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score =  107 bits (257), Expect = 9e-23
 Identities = 50/83 (60%), Positives = 60/83 (72%)
 Frame = +3

Query: 225 WFSVRCAAILRHXYIRSPVGVKPVTKLFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 404
           WF  R A+  RH Y+R   GV  +TK++GGR+RNGV PSHF R S S+AR+ LQ+LE LK
Sbjct: 64  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 123

Query: 405 LVEXVQDGGRILTTQGXRALDRI 473
           +VE  QDGGR LT QG R LDRI
Sbjct: 124 MVEKDQDGGRKLTPQGQRDLDRI 146


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  107 bits (257), Expect = 9e-23
 Identities = 50/83 (60%), Positives = 60/83 (72%)
 Frame = +3

Query: 225 WFSVRCAAILRHXYIRSPVGVKPVTKLFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 404
           WF  R A+  RH Y+R   GV  +TK++GGR+RNGV PSHF R S S+AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 405 LVEXVQDGGRILTTQGXRALDRI 473
           +VE  QDGGR LT QG R LDRI
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDRI 134


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  107 bits (257), Expect = 9e-23
 Identities = 50/83 (60%), Positives = 60/83 (72%)
 Frame = +3

Query: 225 WFSVRCAAILRHXYIRSPVGVKPVTKLFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 404
           WF  R A+  RH Y+R   GV  +TK++GGR+RNGV PSHF R S S+AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 405 LVEXVQDGGRILTTQGXRALDRI 473
           +VE  QDGGR LT QG R LDRI
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDRI 134


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  107 bits (257), Expect = 9e-23
 Identities = 50/83 (60%), Positives = 60/83 (72%)
 Frame = +3

Query: 225 WFSVRCAAILRHXYIRSPVGVKPVTKLFGGRKRNGVTPSHFCRSSGSIARKALQSLEALK 404
           WF  R A+  RH Y+R   GV  +TK++GGR+RNGV PSHF R S S+AR+ LQ+LE LK
Sbjct: 52  WFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLK 111

Query: 405 LVEXVQDGGRILTTQGXRALDRI 473
           +VE  QDGGR LT QG R LDRI
Sbjct: 112 MVEKDQDGGRKLTPQGQRDLDRI 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,500,751
Number of Sequences: 237096
Number of extensions: 1822463
Number of successful extensions: 3017
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3017
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18550579510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)