Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_O15.2
         (1322 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83122-8|CAF31484.1|  582|Caenorhabditis elegans Hypothetical pr...    38   0.016
Z83122-7|CAF31483.1|  618|Caenorhabditis elegans Hypothetical pr...    38   0.016
Z83122-6|CAF31482.1|  587|Caenorhabditis elegans Hypothetical pr...    38   0.016
Z83122-5|CAB05600.1|  654|Caenorhabditis elegans Hypothetical pr...    38   0.016

>Z83122-8|CAF31484.1|  582|Caenorhabditis elegans Hypothetical
           protein R11A5.4b protein.
          Length = 582

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +3

Query: 531 DXVPSXRAGXKSXLGXXXXXSD*XXTSXDRFNGCMKGXXXYXIXLXMGXVXXXXXKIGVK 710
           D V   + G +  +G      D       RF GCM G   Y I   MG V     KIG++
Sbjct: 131 DTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQ 190

Query: 711 IXD 719
           + D
Sbjct: 191 LTD 193


>Z83122-7|CAF31483.1|  618|Caenorhabditis elegans Hypothetical
           protein R11A5.4d protein.
          Length = 618

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +3

Query: 531 DXVPSXRAGXKSXLGXXXXXSD*XXTSXDRFNGCMKGXXXYXIXLXMGXVXXXXXKIGVK 710
           D V   + G +  +G      D       RF GCM G   Y I   MG V     KIG++
Sbjct: 95  DTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQ 154

Query: 711 IXD 719
           + D
Sbjct: 155 LTD 157


>Z83122-6|CAF31482.1|  587|Caenorhabditis elegans Hypothetical
           protein R11A5.4c protein.
          Length = 587

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +3

Query: 531 DXVPSXRAGXKSXLGXXXXXSD*XXTSXDRFNGCMKGXXXYXIXLXMGXVXXXXXKIGVK 710
           D V   + G +  +G      D       RF GCM G   Y I   MG V     KIG++
Sbjct: 64  DTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQ 123

Query: 711 IXD 719
           + D
Sbjct: 124 LTD 126


>Z83122-5|CAB05600.1|  654|Caenorhabditis elegans Hypothetical
           protein R11A5.4a protein.
          Length = 654

 Score = 37.9 bits (84), Expect = 0.016
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +3

Query: 531 DXVPSXRAGXKSXLGXXXXXSD*XXTSXDRFNGCMKGXXXYXIXLXMGXVXXXXXKIGVK 710
           D V   + G +  +G      D       RF GCM G   Y I   MG V     KIG++
Sbjct: 131 DTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQ 190

Query: 711 IXD 719
           + D
Sbjct: 191 LTD 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,862,839
Number of Sequences: 27780
Number of extensions: 30977
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3704777368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)