Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_O14.2
(1224 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 68 1e-13
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 25 1.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 3.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 4.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 4.1
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 4.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 4.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 7.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 9.5
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 68.1 bits (159), Expect = 1e-13
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Frame = +3
Query: 237 KVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHVAN 416
+VA+VT + GIG + + L +G V+ + + D ++ V+ L+S + + C ++N
Sbjct: 8 EVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKLVPLQCDLSN 67
Query: 417 SDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQV-WDKIFEINVKSSWLLAKE 593
+ K+ E + G +DIL++NA +N V+ L+ DE + W KIF+IN+ + +E
Sbjct: 68 QNDILKVIEWVEKNLGAIDILINNATINIDVT--LQNDEVLDWKKIFDINLLGLTCMIQE 125
Query: 594 AYPELIKRGGGNIVFISSIAAYQPMEITNSEAGAEKSLSIVPLKRFGKPEEIASAVAFLT 773
+ K+G N + ++ N +G L+++P+ R +P +AS A T
Sbjct: 126 VLKLMKKKGINNGIIVN----------INDASG----LNLLPMNR-NRPAYLASKCALTT 170
Query: 774 SND 782
D
Sbjct: 171 LTD 173
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 24.6 bits (51), Expect = 1.8
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +3
Query: 402 CHVANSDHRKKL-FEVAKSK 458
C V NS H+KKL F +AK +
Sbjct: 349 CSVTNSPHQKKLRFHLAKER 368
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 3.1
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Frame = +3
Query: 93 KVEKFKHXSTHGSLXVMFRLKFIRSLMNTKMSKTPN-FVRANHNDRLKGKVAIVTASTEG 269
K+ KH S+ +LK R K+S PN + N + +K + S EG
Sbjct: 653 KLMMLKHREFRSSIKASDKLKDSRIKTTEKLSTDPNTHFQVNQSHGIKRS---GSHSWEG 709
Query: 270 IGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITV 389
+ ++K E + + + NV V S+ D TV
Sbjct: 710 DSFKVSKH--EEVSRTSTAGQFPTNVATTVTSMSIDQSTV 747
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 921 KIIYSTINTTINPKTQVKQTNYY 853
KII S +N TI+ K+ YY
Sbjct: 302 KIISSLLNNTIHNNNNYKKLQYY 324
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 921 KIIYSTINTTINPKTQVKQTNYY 853
KII S +N TI+ K+ YY
Sbjct: 313 KIISSLLNNTIHNNNNYKKLQYY 335
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 921 KIIYSTINTTINPKTQVKQTNYY 853
KII S +N TI+ K+ YY
Sbjct: 313 KIISSLLNNTIHNNNNYKKLQYY 335
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 4.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 921 KIIYSTINTTINPKTQVKQTNYY 853
KII S +N TI+ K+ YY
Sbjct: 302 KIISSLLNNTIHNNNNYKKLQYY 324
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 7.2
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 468 LDILVSNAAVNPTV---SPILETDEQVWDKIFEINVKS 572
+D++V++ P V SP E Q+W +I + ++ S
Sbjct: 263 VDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKFSLNS 300
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.2 bits (45), Expect = 9.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +3
Query: 102 KFKHXSTHGSLXVMFRLKFIRSLMNTKMSKTPNFVRANHNDRLK 233
KF + S F++ + T + PN+V NH DR++
Sbjct: 322 KFITDANSSSTPEQFKVIIDNWIKGTPQNNVPNWVMGNH-DRVR 364
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,928
Number of Sequences: 438
Number of extensions: 5649
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 41661861
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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