Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_O13.2
         (1276 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC090048-1|AAH90048.1|   82|Homo sapiens ubiquinol-cytochrome c ...    64   1e-09
BC001390-1|AAH01390.1|   82|Homo sapiens ubiquinol-cytochrome c ...    64   1e-09
D50369-1|BAA23321.1|   93|Homo sapiens low molecular mass ubiqui...    48   6e-05
AF108658-1|AAG43192.1|  422|Homo sapiens p5327 protein.                32   3.9  

>BC090048-1|AAH90048.1|   82|Homo sapiens ubiquinol-cytochrome c
           reductase, complex III subunit VII, 9.5kDa protein.
          Length = 82

 Score = 63.7 bits (148), Expect = 1e-09
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = +2

Query: 122 PMXQRASAGAXSNGIPNXFRSFREXVFKVVPPFIIGYLIYEGVEREHHRLSRKNPADFEN 301
           P  QRA     + GIPN  R  RE  F+VVP F++ YLIY     E  R  RKNPA +EN
Sbjct: 21  PFEQRAYPHVFTKGIPNVLRRIRESFFRVVPQFVVFYLIYTWGTEEFERSKRKNPAAYEN 80

Query: 302 DQ 307
           D+
Sbjct: 81  DK 82


>BC001390-1|AAH01390.1|   82|Homo sapiens ubiquinol-cytochrome c
           reductase, complex III subunit VII, 9.5kDa protein.
          Length = 82

 Score = 63.7 bits (148), Expect = 1e-09
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = +2

Query: 122 PMXQRASAGAXSNGIPNXFRSFREXVFKVVPPFIIGYLIYEGVEREHHRLSRKNPADFEN 301
           P  QRA     + GIPN  R  RE  F+VVP F++ YLIY     E  R  RKNPA +EN
Sbjct: 21  PFEQRAYPHVFTKGIPNVLRRIRESFFRVVPQFVVFYLIYTWGTEEFERSKRKNPAAYEN 80

Query: 302 DQ 307
           D+
Sbjct: 81  DK 82


>D50369-1|BAA23321.1|   93|Homo sapiens low molecular mass
           ubiquinone-binding protein protein.
          Length = 93

 Score = 48.4 bits (110), Expect = 6e-05
 Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +2

Query: 122 PMXQRASAGAXSNGIPNXFRSFREXVFKVVPPFIIGYLIYEGVEREHHRLSRK--NPADF 295
           P  QRA     + GIPN  R  RE  F+VVP F++ YLIY     E  R  R+   P   
Sbjct: 21  PFEQRAYPHVFTKGIPNVLRRIRESFFRVVPQFVVFYLIYTWGTEEFERSKRRIQLPMKM 80

Query: 296 ENDQ 307
            N+Q
Sbjct: 81  TNEQ 84


>AF108658-1|AAG43192.1|  422|Homo sapiens p5327 protein.
          Length = 422

 Score = 32.3 bits (70), Expect = 3.9
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +2

Query: 113 SSLPMXQRASAGAXSNGIPNXFRSFR---EXVFKVVPPFIIGYLIYEGVEREHHRLSR 277
           +SLP    ASAG    G  + FR+F    E V K + P +IG L  E   ++H + S+
Sbjct: 29  ASLPPFHPASAGHPITGQQDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSK 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,431,269
Number of Sequences: 237096
Number of extensions: 966660
Number of successful extensions: 2134
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18275348360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)