BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_O10.2
(1353 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 33 3.1
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 33 3.1
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 33 3.1
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein. 32 5.5
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 32 5.5
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 32 5.5
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 32 5.5
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 32 5.5
EF212153-1|ABN05229.1| 255|Homo sapiens cellular titin isoform ... 32 5.5
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 32 5.5
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 32 5.5
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 32 5.5
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 32 5.5
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 32 5.5
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 32 5.5
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 32 5.5
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 32 5.5
U47742-1|AAC50662.1| 2004|Homo sapiens monocytic leukaemia zinc ... 31 9.6
BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal ic... 31 9.6
BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal ic... 31 9.6
BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal ic... 31 9.6
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 31 9.6
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP S + P P P P PPP + P P PPPP
Sbjct: 325 PPPSRPSVEVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPP 383
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP S + P P P P PPP + P P PPPP
Sbjct: 325 PPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPP 383
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP S + P P P P PPP + P P PPPP
Sbjct: 325 PPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPP 383
>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
Length = 7962
Score = 31.9 bits (69), Expect = 5.5
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 530 PXNPXKX-PKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
P P K P+ P K PPPK+ + PK P PPPP
Sbjct: 7527 PEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPP 7572
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 195 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 246
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>EF212153-1|ABN05229.1| 255|Homo sapiens cellular titin isoform
PEVK variant 1 protein.
Length = 255
Score = 31.9 bits (69), Expect = 5.5
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 530 PXNPXKX-PKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
P P K P+ P K PPPK+ + PK P PPPP
Sbjct: 114 PEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPP 159
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 31.9 bits (69), Expect = 5.5
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 530 PXNPXKX-PKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
P P K P+ P K PPPK+ + PK P PPPP
Sbjct: 11767 PEEPKKIIPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPP 11812
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 31.9 bits (69), Expect = 5.5
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPPH ++P P P+P PP + + +PPP+ + F PPPP
Sbjct: 960 PPPHPSVQQQLQQQPP-PPPPPQP-QPPPQQQHQPPPRPVHLQPMQF--STHIQQPPPP 1014
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 488 PPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
PPP + L KP P P PP PPP FP P PPPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPP------PPPHLLSCWLPP-FPSGPPIIPPPP 247
>U47742-1|AAC50662.1| 2004|Homo sapiens monocytic leukaemia zinc
finger protein protein.
Length = 2004
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 530 PXNPXKXPKPXNPPXKXKXKPPPKKXKIXXKXFFPKXXPXXPPPP 664
P P + P+P P + +PPP + + + P+ P PPPP
Sbjct: 1652 PPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQ---PQPQPQQPPPP 1693
>BC099644-1|AAH99644.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 31.1 bits (67), Expect = 9.6
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -1
Query: 663 GGGGXXGXXFGKKXFXKIFXFXGGGFXFXXXGGFXGLGXXWGFXG 529
GGG G FG F GGGF GGF G G G G
Sbjct: 93 GGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGG 137
>BC099643-1|AAH99643.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 31.1 bits (67), Expect = 9.6
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -1
Query: 663 GGGGXXGXXFGKKXFXKIFXFXGGGFXFXXXGGFXGLGXXWGFXG 529
GGG G FG F GGGF GGF G G G G
Sbjct: 93 GGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGG 137
>BC096294-1|AAH96294.1| 639|Homo sapiens keratin 2 (epidermal
ichthyosis bullosa of Siemens) protein.
Length = 639
Score = 31.1 bits (67), Expect = 9.6
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -1
Query: 663 GGGGXXGXXFGKKXFXKIFXFXGGGFXFXXXGGFXGLGXXWGFXG 529
GGG G FG F GGGF GGF G G G G
Sbjct: 93 GGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGG 137
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 31.1 bits (67), Expect = 9.6
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Frame = +2
Query: 485 IPPPHLXSXXLFXKKPXNPXKXPKPXNPPXKXKXKPPPK-KXKIXXKXFFPKXXPXXPPP 661
+PPP + + P P P P +PP PPP ++ P P PPP
Sbjct: 940 LPPPRAPALPSEARAP--PPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPP 997
Query: 662 P 664
P
Sbjct: 998 P 998
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,498,884
Number of Sequences: 237096
Number of extensions: 822484
Number of successful extensions: 2906
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2625
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19566860838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -