Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_O08.2
         (1228 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098          142   4e-34
01_07_0123 + 41206782-41206844,41207701-41207782,41208587-412087...   134   1e-31
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825...    31   2.4  
04_04_0360 - 24684159-24684565,24684654-24685089                       29   5.7  

>03_01_0148 + 1174097-1174289,1174539-1174672,1174760-1175098
          Length = 221

 Score =  142 bits (345), Expect = 4e-34
 Identities = 75/151 (49%), Positives = 101/151 (66%)
 Frame = +1

Query: 352 SKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKNILFVINSPDVYKNPHSDTYIVFGEA 531
           SKQSR EKK+RK M KLG+KPV GV R+TI+++KNILFV++ PDV+K+P S+TY++FGEA
Sbjct: 75  SKQSRSEKKSRKAMMKLGMKPVTGVSRITIKRAKNILFVVSKPDVFKSPTSETYVIFGEA 134

Query: 532 KIEDLSTQATMAAAERFKAPETTATGNDASTTGTTVAPIAXXXXXXXXXXXXXXXXXXXI 711
           KIEDLS+Q    AA++F+  + +        +    A  A                   +
Sbjct: 135 KIEDLSSQLQAQAAQQFRMQDLSKV-----MSKPDAAAAAPADEEEEVDETGIEPRDIDL 189

Query: 712 VMSQANVSRAKAVRALKNNQSDIVNAIMELT 804
           VM+QA+VSRAKAV+ALK +  DIV+AIMELT
Sbjct: 190 VMTQASVSRAKAVKALKAHDGDIVSAIMELT 220


>01_07_0123 +
           41206782-41206844,41207701-41207782,41208587-41208717,
           41208758-41209147
          Length = 221

 Score =  134 bits (324), Expect = 1e-31
 Identities = 83/175 (47%), Positives = 102/175 (58%), Gaps = 19/175 (10%)
 Frame = +1

Query: 337 DIVSKSKQSRGEKKARKIMSKLGLKPVQGVERVTIRKSKN-------------------I 459
           D   +SKQSR EKK+RK M KLG+K + GV RVTI+KSKN                   I
Sbjct: 53  DASGRSKQSRSEKKSRKAMQKLGMKTITGVSRVTIKKSKNAHRIVIYHCILLNFSLHYQI 112

Query: 460 LFVINSPDVYKNPHSDTYIVFGEAKIEDLSTQATMAAAERFKAPETTATGNDASTTGTTV 639
           LFVI+ PDV+K+P+SDTY++FGEAKIEDLS+Q    AAE+FKAP       D S   +  
Sbjct: 113 LFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAAEQFKAP-------DLSNVISKA 165

Query: 640 APIAXXXXXXXXXXXXXXXXXXXIVMSQANVSRAKAVRALKNNQSDIVNAIMELT 804
            P A                   +VM+QA VSR++AV+ALK    DIV AIMELT
Sbjct: 166 EPSAAAQDDEEVDESGVEPKDIELVMTQATVSRSRAVKALKAANGDIVTAIMELT 220


>08_02_0516 +
           18080706-18080760,18081796-18081885,18082479-18082573,
           18083658-18083726,18083812-18084393
          Length = 296

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 503 QTPTLFLVKPRLKICPHRPPWLQQRDSRHQRPQPLA 610
           Q P    ++ +L   P +PP LQ +   HQ+PQP A
Sbjct: 244 QQPPQLQLQSQLHPQPQQPPQLQPQPQLHQQPQPQA 279


>04_04_0360 - 24684159-24684565,24684654-24685089
          Length = 280

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 630 SSCGSVIASGCGLWCLESLCCSHGGLCG 547
           S+ G   A  CG  C  ++CCS  G CG
Sbjct: 14  SATGQASAQNCG--CQSNMCCSKWGYCG 39


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,392,526
Number of Sequences: 37544
Number of extensions: 334793
Number of successful extensions: 900
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3771247248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)