Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_O04.2
         (1279 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   1.4  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   4.3  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    23   5.7  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   5.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   7.5  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    23   7.5  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   10.0 
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   10.0 
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   10.0 
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   10.0 
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   10.0 
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   10.0 

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 779 FLLTYIDTLLTSPIHYLFTKNIYENFFNKPKV--FISNSRFLI 657
           F  T  D +L       F K+IYE + N+P V  + + S FL+
Sbjct: 42  FFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLL 84


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 788 Y*NRFPFEIPPLCVGLVRRRNIFRCVNLRLDIKRRSFLLI 907
           Y   FP E       ++RR+ +F  VNL L     SFL +
Sbjct: 213 YKGDFPTETDITFYIIIRRKTLFYTVNLILPTVLISFLCV 252


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKYK 544
           N+ RK+  T  + S    E+ RSK   +  +  N YK
Sbjct: 54  NSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYK 90


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKYK 544
           N+ RK+  T  + S    E+ RSK   +  +  N YK
Sbjct: 287 NSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYK 323


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKY 547
           N+ RK+  T  + S    E+ RSK + +  +  N Y
Sbjct: 287 NSYRKYRETSKERSRDRTERERSKERKIISSLSNNY 322


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKY 547
           N+ RK+  T  + S    E+ RSK + +  +  N Y
Sbjct: 292 NSYRKYRETSKERSRDKTERERSKERKIISSLSNNY 327


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKY 547
           N+ RK+ +T  + S    E+ RSK   +  +  N Y
Sbjct: 54  NSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNY 89


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKY 547
           N+ RK+ +T  + S    E+ RSK   +  +  N Y
Sbjct: 54  NSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNY 89


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKY 547
           N+ RK+ +T  + S    E+ RSK   +  +  N Y
Sbjct: 54  NSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNY 89


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKY 547
           N+ RK+ +T  + S    E+ RSK   +  +  N Y
Sbjct: 54  NSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNY 89


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKY 547
           N+ RK+ +T  + S    E+ RSK   +  +  N Y
Sbjct: 54  NSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNY 89


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 654 NNSRKFDRTGIDSSDLNAEKMRSKNKMLRDASYNKY 547
           N+ RK+ +T  + S    E+ RSK   +  +  N Y
Sbjct: 54  NSYRKYRKTSKERSRDRTERERSKEPKIISSLSNNY 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,206
Number of Sequences: 438
Number of extensions: 3862
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43822995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)