Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_N21.2
(1254 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.009
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.009
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.009
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.020
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.14
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.14
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.14
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.56
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.56
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 32 0.98
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.98
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 32 0.98
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.98
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.98
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 32 0.98
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.3
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 31 2.3
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 3.0
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 4.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 26 4.4
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 5.2
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.1
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/84 (27%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Frame = +2
Query: 443 PXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXGPXGGXF 622
P PP P G G PPP G P+ G P P G
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 623 PKXPPP--XKXXKKXXPXXXGGKP 688
P PPP P GG P
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 31.9 bits (69), Expect = 0.98
Identities = 22/82 (26%), Positives = 22/82 (26%)
Frame = +2
Query: 443 PXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXGPXGGXF 622
P PP P GG PP G P G P G P P G
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGS 328
Query: 623 PKXPPPXKXXKKXXPXXXGGKP 688
P PP K G P
Sbjct: 329 PPPPPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/84 (27%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Frame = +2
Query: 443 PXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXGPXGGXF 622
P PP P G G PPP G P+ G P P G
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 623 PKXPPP--XKXXKKXXPXXXGGKP 688
P PPP P GG P
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 31.9 bits (69), Expect = 0.98
Identities = 22/82 (26%), Positives = 22/82 (26%)
Frame = +2
Query: 443 PXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXGPXGGXF 622
P PP P GG PP G P G P G P P G
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGS 349
Query: 623 PKXPPPXKXXKKXXPXXXGGKP 688
P PP K G P
Sbjct: 350 PPPPPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.7 bits (86), Expect = 0.009
Identities = 23/84 (27%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Frame = +2
Query: 443 PXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXGPXGGXF 622
P PP P G G PPP G P+ G P P G
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 623 PKXPPP--XKXXKKXXPXXXGGKP 688
P PPP P GG P
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 31.9 bits (69), Expect = 0.98
Identities = 22/82 (26%), Positives = 22/82 (26%)
Frame = +2
Query: 443 PXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXGPXGGXF 622
P PP P GG PP G P G P G P P G
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP---PAGTGS 334
Query: 623 PKXPPPXKXXKKXXPXXXGGKP 688
P PP K G P
Sbjct: 335 PPPPPRQKRQAPERSPPTGSPP 356
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.020
Identities = 36/149 (24%), Positives = 40/149 (26%), Gaps = 1/149 (0%)
Frame = +2
Query: 425 GFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXG 604
GF P P GG P + P G P + P+ G
Sbjct: 286 GFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGP---PQGG 342
Query: 605 PXGGXFPKXPPPXKXXKKXXPXXXGGKPQXXXKXPGXX-PXKXXXXXXXXXXXXXXKTXP 781
P G F PP + P GG P PG P P
Sbjct: 343 PPQGSF--GAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAP 400
Query: 782 XXPXGXGGXFXKPPXXXXXXGXGXPPQXG 868
P G GG PP G PPQ G
Sbjct: 401 QGPGGPGGYGPPPPGGPGAPGSYGPPQGG 429
Score = 37.5 bits (83), Expect = 0.020
Identities = 28/105 (26%), Positives = 31/105 (29%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXX 577
PP G GF P PP G G PPP P+ G P +
Sbjct: 321 PPPQGAPQQGFGAPPQGPPQGGPPQ----GSFGAPPPQQFHAPSPQSFGGPPPPVSSAPG 376
Query: 578 XXGXKPKXGPXGGXFPKXPPPXKXXKKXXPXXXGGKPQXXXKXPG 712
P+ GP G PPP P GG PG
Sbjct: 377 NFAPPPQSGPPGAF---APPPSAFGAPQGPGGPGGYGPPPPGGPG 418
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPX---PPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKP 550
P PG G G+ P P P P GG G PPP G P G P
Sbjct: 400 PQGPGGPG-GYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFP 452
Score = 28.7 bits (61), Expect = 9.1
Identities = 23/88 (26%), Positives = 25/88 (28%), Gaps = 1/88 (1%)
Frame = +1
Query: 649 FXKXXPXXXGGKTPXXXKKXXXXPXKTPXGXPXFXXXXXTXNXPXXXXGXXGXFLKTPRG 828
F P GG P G P + G G + P G
Sbjct: 356 FHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPG 415
Query: 829 GXPXXGXXXPPXGGXXK-NPPXNPXGGP 909
G G PP GG PP P GGP
Sbjct: 416 GPGAPGSYGPPQGGPGGFGPP--PPGGP 441
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.14
Identities = 25/81 (30%), Positives = 25/81 (30%)
Frame = +2
Query: 425 GFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXG 604
G P P P P G PP GG P GG P G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-------PISGGPPPPPP 763
Query: 605 PXGGXFPKXPPPXKXXKKXXP 667
P GG P PPP K P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGP 784
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXP 532
PP PG P P PP P GG PPP GG P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPIS-GGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -1
Query: 939 GGXXXXIXPXRXPXWVXXGVFXXPPXWGGXPXPXXXXXXGGFXKXPPXP 793
GG P P + G PP GG P P GGF PP P
Sbjct: 740 GGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -2
Query: 542 PXFXGXPXXPXXGGXNPXPXPXXXGPGXXXGGXGXGPXNXXPXPXGXXXFXXXXKPPXPP 363
P G P P G P P GP G P + P P PP PP
Sbjct: 720 PPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 362 PXPXK 348
P K
Sbjct: 777 PGGFK 781
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.14
Identities = 25/81 (30%), Positives = 25/81 (30%)
Frame = +2
Query: 425 GFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXG 604
G P P P P G PP GG P GG P G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-------PISGGPPPPPP 763
Query: 605 PXGGXFPKXPPPXKXXKKXXP 667
P GG P PPP K P
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGP 784
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXP 532
PP PG P P PP P GG PPP GG P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPIS-GGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -1
Query: 939 GGXXXXIXPXRXPXWVXXGVFXXPPXWGGXPXPXXXXXXGGFXKXPPXP 793
GG P P + G PP GG P P GGF PP P
Sbjct: 740 GGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -2
Query: 542 PXFXGXPXXPXXGGXNPXPXPXXXGPGXXXGGXGXGPXNXXPXPXGXXXFXXXXKPPXPP 363
P G P P G P P GP G P + P P PP PP
Sbjct: 720 PPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 362 PXPXK 348
P K
Sbjct: 777 PGGFK 781
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.14
Identities = 25/81 (30%), Positives = 25/81 (30%)
Frame = +2
Query: 425 GFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXXXXGXKPKXG 604
G P P P P G PP GG P GG P G P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-------PISGGPPPPPP 346
Query: 605 PXGGXFPKXPPPXKXXKKXXP 667
P GG P PPP K P
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGP 367
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXP 532
PP PG P P PP P GG PPP GG P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPIS-GGPPPPPPPPGGCPPPP 355
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -1
Query: 939 GGXXXXIXPXRXPXWVXXGVFXXPPXWGGXPXPXXXXXXGGFXKXPPXP 793
GG P P + G PP GG P P GGF PP P
Sbjct: 323 GGPPPPPPPGGLPP-ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -2
Query: 542 PXFXGXPXXPXXGGXNPXPXPXXXGPGXXXGGXGXGPXNXXPXPXGXXXFXXXXKPPXPP 363
P G P P G P P GP G P + P P PP PP
Sbjct: 303 PPITGGPPPPPPPGGLP---PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 362 PXPXK 348
P K
Sbjct: 360 PGGFK 364
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.56
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXX 577
PP P G P P PP P G PPP + P GG P
Sbjct: 287 PPPPPSSGM---WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 578 XXGXKPKXGP-----XGGXFPKXPP 637
G P P G +P PP
Sbjct: 344 PGGMPPPPPPRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.56
Identities = 24/85 (28%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXX 577
PP P G P P PP P G PPP + P GG P
Sbjct: 297 PPPPPSSGM---WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 578 XXGXKPKXGP-----XGGXFPKXPP 637
G P P G +P PP
Sbjct: 354 PGGMPPPPPPRYPSAGPGMYPPPPP 378
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.98
Identities = 27/108 (25%), Positives = 32/108 (29%), Gaps = 2/108 (1%)
Frame = +2
Query: 362 GGGGXVFXXXKXPPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXP-PPXGGKXXXPKX 538
GGGG P PG G P P P G G P P P
Sbjct: 94 GGGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVPTPCKPCP 153
Query: 539 GGKPXKK-IXXKXXXXGXKPKXGPXGGXFPKXPPPXKXXKKXXPXXXG 679
GG+P + G + GG P+ PP + P G
Sbjct: 154 GGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSG 201
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.98
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 2/79 (2%)
Frame = +2
Query: 407 PGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXG--GKXXXPKXGGKPXKKIXXKXXX 580
PG G P P P GGG G P P G G P G P
Sbjct: 141 PGPAGVP-GQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSG 199
Query: 581 XGXKPKXGPXGGXFPKXPP 637
+ GP G P+ PP
Sbjct: 200 QRGRGLPGPSGAPGPQGPP 218
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.98
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 437 PXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGG 544
P P PP P GG G PPP G + GG
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.98
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 437 PXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGG 544
P P PP P GG G PPP G + GG
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.98
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 437 PXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGG 544
P P PP P GG G PPP G + GG
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.98
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 437 PXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGG 544
P P PP P GG G PPP G + GG
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKI 562
PP P + P P PP P GG PPP GG K KKI
Sbjct: 564 PPPPLPQNLSGAPPPPPPP-----PPMLGGPPPPPPPPGGLMGPASNDAKTIKKI 613
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = +2
Query: 347 FXXXXGGGGXVFXXXKXPPXPGXRGXGFXXPXPXPPXXXXX---PXXXGGGXGXPPPXGG 517
F GGGG PP P G P P P GGG G P P GG
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPP-XGGKXXXPKXGGKP 550
PP P GF P P P P GG PPP GG P G P
Sbjct: 67 PPVPN----GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 30.7 bits (66), Expect = 2.3
Identities = 23/79 (29%), Positives = 25/79 (31%), Gaps = 2/79 (2%)
Frame = +2
Query: 407 PGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXG--GKXXXPKXGGKPXKKIXXKXXX 580
PG G P P P GGG G P P G G P G P
Sbjct: 139 PGPAGAP-GNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSG 197
Query: 581 XGXKPKXGPXGGXFPKXPP 637
+ GP G P+ PP
Sbjct: 198 QRSRGLPGPSGRPGPQGPP 216
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.3 bits (65), Expect = 3.0
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +2
Query: 344 FFXXXXGGGGXVFXXXKXPPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPP 508
F GGGG PP P G G P P P GGG PPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLP-PLSLPSLGGGGGCCPPP 70
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.9 bits (64), Expect = 4.0
Identities = 25/93 (26%), Positives = 26/93 (27%)
Frame = +2
Query: 362 GGGGXVFXXXKXPPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXG 541
GG F + PP G G P PP P G PP G G
Sbjct: 194 GGPPGPFNPSEAPPSGGPTGP--FDPSGAPPSGG--PPGPFNPSGAPPSGGPPGPFDPSG 249
Query: 542 GKPXKKIXXKXXXXGXKPKXGPXGGXFPKXPPP 640
P G P GP G P PP
Sbjct: 250 APPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 282
Score = 28.7 bits (61), Expect = 9.1
Identities = 25/93 (26%), Positives = 26/93 (27%)
Frame = +2
Query: 362 GGGGXVFXXXKXPPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXG 541
GG F PP G G P PP P G PP G G
Sbjct: 239 GGPPGPFDPSGAPPSGGPPGP--FNPSGAPPSGG--PPGPFDPSGAPPSGGPPGPFDPSG 294
Query: 542 GKPXKKIXXKXXXXGXKPKXGPXGGXFPKXPPP 640
P G +P GP G P PP
Sbjct: 295 APPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPP 327
Score = 28.7 bits (61), Expect = 9.1
Identities = 25/93 (26%), Positives = 26/93 (27%)
Frame = +2
Query: 362 GGGGXVFXXXKXPPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXG 541
GG F PP G G P PP P G PP G G
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGP--FDPSGAPPSGG--PPGPFDPSGAPPSGGPPGPFDPSG 309
Query: 542 GKPXKKIXXKXXXXGXKPKXGPXGGXFPKXPPP 640
+P G P GP G P PP
Sbjct: 310 AQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 342
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 25.8 bits (54), Expect(2) = 4.4
Identities = 23/90 (25%), Positives = 24/90 (26%)
Frame = +2
Query: 398 PPXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKIXXKXX 577
PP PG G P P PP G G PPP G P
Sbjct: 707 PPPPGIPGY---PPAPPPP-----------GVGPPPPQGIPPMGFDPNKPPPPMFQQGFN 752
Query: 578 XXGXKPKXGPXGGXFPKXPPPXKXXKKXXP 667
P G G PPP + P
Sbjct: 753 AGAPPPPFGRGAGPMSSFPPPPRGGMHHMP 782
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +2
Query: 779 PXXPXGXGGXFXKPPXXXXXXGXGXPP 859
P G GG PP G G PP
Sbjct: 785 PSFRGGRGGHGGPPPPHFDRRGGGGPP 811
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.5 bits (63), Expect = 5.2
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 401 PXPGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXG 541
P G G G P PP P G G PPP P G
Sbjct: 20 PSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAPSYG 66
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.7 bits (61), Expect = 9.1
Identities = 23/95 (24%), Positives = 25/95 (26%), Gaps = 2/95 (2%)
Frame = +2
Query: 443 PXPPXXXXXPXXXGGGXGXPPPXGGKXXXPKXGGKPXKKI--XXKXXXXGXKPKXGPXGG 616
P P P GG G PP G P G P + K P GG
Sbjct: 23 PNDPLTAADPGKTSGGGGDPP--AGGQPTPGDAGNPNSQAGDSGKPNPPAGDPTKLKPGG 80
Query: 617 XFPKXPPPXKXXKKXXPXXXGGKPQXXXKXPGXXP 721
P P P G P+ P P
Sbjct: 81 GGPAGKPGPNAGDTTKPNSQSGDPKPRGGDPAGKP 115
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Frame = +2
Query: 407 PGXRGXGFXXPXPXPPXXXXXPXXXGGGXGXPPPXG--GKXXXPKXGGKPXKKIXXKXXX 580
PG G P P P GGG G P P G G P G P
Sbjct: 141 PGPAGAP-GQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSG 199
Query: 581 XGXKPKXGPXGGXFPKXPP 637
+ GP G + PP
Sbjct: 200 QRGRGLPGPSGAPGSQGPP 218
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -1
Query: 870 PPXWGGXPXPXXXXXXGGFXKXPPXPXGXXGXVXXXXPGXEXGGPXGGFXGXXPGFFXXX 691
PP GG P G F P P G G PG G GG+ PG
Sbjct: 286 PPGQGGPGMP------GSFPPGAPGPGGP-GMPGSFAPGAPGPGGPGGYPSGGPGMPGMQ 338
Query: 690 WGFP 679
G+P
Sbjct: 339 GGYP 342
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Frame = +1
Query: 349 FXGXGGGXGGFXXXKKXXXPXG--KGXXFXGPXPXPPXXXPGPXXXGXGXGFXPPXXGXX 522
+ G GGG GG G P P PP P P G G+ G
Sbjct: 272 YAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGG 331
Query: 523 GXPXXXG 543
G G
Sbjct: 332 GGSSYSG 338
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.1
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Frame = +1
Query: 349 FXGXGGGXGGFXXXKKXXXPXG--KGXXFXGPXPXPPXXXPGPXXXGXGXGFXPPXXGXX 522
+ G GGG GG G P P PP P P G G+ G
Sbjct: 272 YAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGG 331
Query: 523 GXPXXXG 543
G G
Sbjct: 332 GGSSYSG 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.152 0.517
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,539,604
Number of Sequences: 27780
Number of extensions: 312704
Number of successful extensions: 907
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -