Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_N18.2
(1265 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.14
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.25
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.25
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.57
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.57
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.57
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.57
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.57
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.75
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 32 0.99
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 27 2.1
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 30 4.0
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 4.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 4.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 4.0
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 7.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 7.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 7.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 7.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 7.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 7.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 7.0
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 7.0
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 9.2
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 29 9.2
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 1253 PPXXXPPXGXXXPPXPXGKXXXXPXXXGXXXGPXGXPGXPXXFXXPXGXP 1104
PP PP PP G G P G PG P + P G P
Sbjct: 381 PPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGP 430
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/75 (25%), Positives = 21/75 (28%)
Frame = -1
Query: 1262 GXXPPXXXPPXGXXXPPXPXGKXXXXPXXXGXXXGPXGXPGXPXXFXXPXGXPPXXXXXF 1083
G PP G PP G P G PG P + P P +
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQG-PGGPGGYGPPPPGGPGAPGSY 423
Query: 1082 XXXXRGXAXXKPPPP 1038
G PPPP
Sbjct: 424 GPPQGGPGGFGPPPP 438
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.9 bits (74), Expect = 0.25
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = -1
Query: 1067 GXAXXKPPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPPXXXPGXXXXXXX 888
G A +PPPPP A P P P PP P
Sbjct: 568 GLAPARPPPPPPSSGTRGIAPSRPL--PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPI 625
Query: 887 XRXXXPXXNPLSPXXGRFLXAXKPPXPPPXP 795
P P P + A PP PPP P
Sbjct: 626 SSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.9 bits (74), Expect = 0.25
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = -1
Query: 1067 GXAXXKPPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPPXXXPGXXXXXXX 888
G A +PPPPP A P P P PP P
Sbjct: 394 GLAPARPPPPPPSSGTRGIAPSRPL--PQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPI 451
Query: 887 XRXXXPXXNPLSPXXGRFLXAXKPPXPPPXP 795
P P P + A PP PPP P
Sbjct: 452 SSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.57
Identities = 28/113 (24%), Positives = 30/113 (26%)
Frame = -1
Query: 1262 GXXPPXXXPPXGXXXPPXPXGKXXXXPXXXGXXXGPXGXPGXPXXFXXPXGXPPXXXXXF 1083
G P PP PP P P G GP G PG P PP
Sbjct: 282 GMTPRPPPPPSSGMWPPPP-------PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 1082 XXXXRGXAXXKPPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPP 924
G PPP P + +P PP P PP
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYP--SAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 32.3 bits (70), Expect = 0.75
Identities = 25/85 (29%), Positives = 26/85 (30%)
Frame = -1
Query: 1049 PPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPPXXXPGXXXXXXXXRXXXP 870
PPPPP P P PP P P P PP PG P
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGP--PGMGGMPPPP--PPGMRYPG----GMPP 349
Query: 869 XXNPLSPXXGRFLXAXKPPXPPPXP 795
P P G + PP PP P
Sbjct: 350 PPPPRYPSAGPGMYPPPPPSRPPAP 374
Score = 31.1 bits (67), Expect = 1.7
Identities = 29/102 (28%), Positives = 30/102 (29%)
Frame = -2
Query: 1255 PPPXXXPXGXXXXPPXPXXXXXXXXXXXXGXXXPXGXRGXPXXXXSXRVXPPXXGXXFXX 1076
PPP P G PP G P G G P PP G +
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPP--------PPPPGMRYP- 344
Query: 1075 XSGGGPXXNPPXPPXXGXGXXXPXXPXFFXXXPRFXGXPXPP 950
GG P PP P G G P P P G PP
Sbjct: 345 --GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
Score = 28.7 bits (61), Expect = 9.2
Identities = 25/105 (23%), Positives = 27/105 (25%)
Frame = -1
Query: 1118 PXGXPPXXXXXFXXXXRGXAXXKPPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXX 939
P PP +G PPPPP P PP P
Sbjct: 241 PGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPP-----PSSGM 295
Query: 938 XPXPPXXXPGXXXXXXXXRXXXPXXNPLSPXXGRFLXAXKPPXPP 804
P PP PG P P S + PP PP
Sbjct: 296 WPPPPPPPPGRTPGPPGMPGMPPPPPP-SRFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.57
Identities = 28/113 (24%), Positives = 30/113 (26%)
Frame = -1
Query: 1262 GXXPPXXXPPXGXXXPPXPXGKXXXXPXXXGXXXGPXGXPGXPXXFXXPXGXPPXXXXXF 1083
G P PP PP P P G GP G PG P PP
Sbjct: 292 GMTPRPPPPPSSGMWPPPP-------PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 1082 XXXXRGXAXXKPPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPP 924
G PPP P + +P PP P PP
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYP--SAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 32.3 bits (70), Expect = 0.75
Identities = 25/85 (29%), Positives = 26/85 (30%)
Frame = -1
Query: 1049 PPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPPXXXPGXXXXXXXXRXXXP 870
PPPPP P P PP P P P PP PG P
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGP--PGMGGMPPPP--PPGMRYPG----GMPP 359
Query: 869 XXNPLSPXXGRFLXAXKPPXPPPXP 795
P P G + PP PP P
Sbjct: 360 PPPPRYPSAGPGMYPPPPPSRPPAP 384
Score = 31.1 bits (67), Expect = 1.7
Identities = 29/102 (28%), Positives = 30/102 (29%)
Frame = -2
Query: 1255 PPPXXXPXGXXXXPPXPXXXXXXXXXXXXGXXXPXGXRGXPXXXXSXRVXPPXXGXXFXX 1076
PPP P G PP G P G G P PP G +
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPP--------PPPPGMRYP- 354
Query: 1075 XSGGGPXXNPPXPPXXGXGXXXPXXPXFFXXXPRFXGXPXPP 950
GG P PP P G G P P P G PP
Sbjct: 355 --GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
Score = 28.7 bits (61), Expect = 9.2
Identities = 25/105 (23%), Positives = 27/105 (25%)
Frame = -1
Query: 1118 PXGXPPXXXXXFXXXXRGXAXXKPPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXX 939
P PP +G PPPPP P PP P
Sbjct: 251 PGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPP-----PSSGM 305
Query: 938 XPXPPXXXPGXXXXXXXXRXXXPXXNPLSPXXGRFLXAXKPPXPP 804
P PP PG P P S + PP PP
Sbjct: 306 WPPPPPPPPGRTPGPPGMPGMPPPPPP-SRFGPPGMGGMPPPPPP 349
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.57
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 1049 PPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPPXXXP 912
PPPPP + P A P PP P P P PP P
Sbjct: 237 PPPPPPPKGSPPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSP 280
Score = 30.3 bits (65), Expect = 3.0
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 5/104 (4%)
Frame = -2
Query: 1216 PPXPXXXXXXXXXXXXGXXXPXGXRGXPXXXXSXRVXPPXXGXXFXXXSGGGP-----XX 1052
PP P G P G P + PP G +GG P
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 1051 NPPXPPXXGXGXXXPXXPXFFXXXPRFXGXPXPPLXXXXPXPXP 920
PP PP G P P+ G P PP P P P
Sbjct: 297 PPPPPPPRGSPPTGSLPP------PQAGGSP-PPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.57
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 1049 PPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPPXXXP 912
PPPPP + P A P PP P P P PP P
Sbjct: 258 PPPPPPPKGSPPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSP 301
Score = 30.3 bits (65), Expect = 3.0
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 5/104 (4%)
Frame = -2
Query: 1216 PPXPXXXXXXXXXXXXGXXXPXGXRGXPXXXXSXRVXPPXXGXXFXXXSGGGP-----XX 1052
PP P G P G P + PP G +GG P
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 1051 NPPXPPXXGXGXXXPXXPXFFXXXPRFXGXPXPPLXXXXPXPXP 920
PP PP G P P+ G P PP P P P
Sbjct: 318 PPPPPPPRGSPPTGSLPP------PQAGGSP-PPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.57
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 1049 PPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPPXXXP 912
PPPPP + P A P PP P P P PP P
Sbjct: 243 PPPPPPPKGSPPLAGSGS--PPPPPAAGSPPPPRTGSPPPPPTGSP 286
Score = 30.3 bits (65), Expect = 3.0
Identities = 27/104 (25%), Positives = 30/104 (28%), Gaps = 5/104 (4%)
Frame = -2
Query: 1216 PPXPXXXXXXXXXXXXGXXXPXGXRGXPXXXXSXRVXPPXXGXXFXXXSGGGP-----XX 1052
PP P G P G P + PP G +GG P
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 1051 NPPXPPXXGXGXXXPXXPXFFXXXPRFXGXPXPPLXXXXPXPXP 920
PP PP G P P+ G P PP P P P
Sbjct: 303 PPPPPPPRGSPPTGSLPP------PQAGGSP-PPAGTGSPPPPP 339
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein
F02D10.1 protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.75
Identities = 28/114 (24%), Positives = 28/114 (24%)
Frame = +1
Query: 913 GXXXGGXGXXXXXGXXGXXKXGGXXGKXXXXXAXXGXNRKXGGGGGXXXAXPRXXXKXXX 1092
G GG G G GG GK G G G A
Sbjct: 104 GEAAGGGGGCTGCCNPGPPGPGGRPGKPGTP-GKPGAPGNPGASGKGAAAPCEPSTPPPC 162
Query: 1093 XXXGGXPXGXXKXXGXPGNPXGPXXXPXXXGXXXXXPXGXGGXXXPXGGXXXGG 1254
P G G PG P GP G P G G P G G
Sbjct: 163 QPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPG 216
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.9 bits (69), Expect = 0.99
Identities = 23/85 (27%), Positives = 25/85 (29%)
Frame = +1
Query: 796 GXGGGXGGFXAXRXRPXXGERGXXXGXXFRFXXXXXXXPGXXXGGXGXXXXXGXXGXXKX 975
G GGG GGF G G G G GG G G G
Sbjct: 65 GFGGGNGGFGGGGGGSGGGGGGNNIGSLVG-SLIGGGGGGGNYGGGGGNQGGGGGGGFNF 123
Query: 976 GGXXGKXXXXXAXXGXNRKXGGGGG 1050
G G ++ GGGGG
Sbjct: 124 NDIGGLINSMGGGGGGGQRQGGGGG 148
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 927 GXGXXXXXGGXGXPXXRGXXXKXXGXXGXXXPXPXXGGXGG 1049
G G GG G P G G G P P GG GG
Sbjct: 170 GMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 1105 GXPXGXXKXXGXPGNPXGPXXXPXXXGXXXXXPXGXGGXXXPXGGXXXGGXXP 1263
G P G G PG+ G P G P G GG P G GG P
Sbjct: 172 GGPPGHGGMGGPPGH--GGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLP 222
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 927 GXGXXXXXGGXGXPXXRGXXXKXXGXXGXXXPXPXXGGXGG 1049
G G GG G P G G G P P GG GG
Sbjct: 450 GMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 1105 GXPXGXXKXXGXPGNPXGPXXXPXXXGXXXXXPXGXGGXXXPXGGXXXGGXXP 1263
G P G G PG+ G P G P G GG P G GG P
Sbjct: 452 GGPPGHGGMGGPPGH--GGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLP 502
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 27.5 bits (58), Expect(2) = 2.1
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -1
Query: 1049 PPPPPXXRXXPXXAXXXXXFPXXPPXXXXPXXPXXXXXPXPP 924
PPPP P A PP P P P PP
Sbjct: 326 PPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPP 367
Score = 21.8 bits (44), Expect(2) = 2.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 818 PPXPPPXPXT 789
PP PPP P T
Sbjct: 363 PPPPPPPPQT 372
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein 111
protein.
Length = 332
Score = 29.9 bits (64), Expect = 4.0
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = -1
Query: 1262 GXXPPXXXP-PXGXXXPPXPXGKXXXXPXXXGXXXGPXGXPGXPXXFXXPXG 1110
G P P P G P P G P GP G PG P P G
Sbjct: 214 GEPGPAGYPGPRGAPGPVGPPGVAEEGPDGLPGPAGPPGKPGMPGPMGTPGG 265
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.9 bits (64), Expect = 4.0
Identities = 22/84 (26%), Positives = 24/84 (28%)
Frame = +1
Query: 796 GXGGGXGGFXAXRXRPXXGERGXXXGXXFRFXXXXXXXPGXXXGGXGXXXXXGXXGXXKX 975
G GG GG G +G G F F GG G G G
Sbjct: 68 GGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGGGQRQGGGGGG--F 125
Query: 976 GGXXGKXXXXXAXXGXNRKXGGGG 1047
G G G + GGGG
Sbjct: 126 GDILGGIGSLIGGGGGGQYNGGGG 149
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 951 GGXGXPXXRGXXXKXXGXXGXXXPXPXXGGXGGFXXGPPP 1070
GG G +G G P P GG GGF PPP
Sbjct: 640 GGAGAKANKGWYGSGGGS-SMPMPVPPPGGLGGFMPPPPP 678
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 951 GGXGXPXXRGXXXKXXGXXGXXXPXPXXGGXGGFXXGPPP 1070
GG G +G G P P GG GGF PPP
Sbjct: 640 GGAGAKANKGWYGSGGGS-SMPMPVPPPGGLGGFMPPPPP 678
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 7.0
Identities = 30/115 (26%), Positives = 31/115 (26%), Gaps = 1/115 (0%)
Frame = +1
Query: 913 GXXXGGXGXXXXXGXXGXXKXGGXXGKXXXXXAXXGXNRKXGGGGGXXXAXPRXXXKXXX 1092
G GG G G GG GK G G G A +
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKP-GKPGAPGAPGNPGKGASAPCEPVTQPPC 147
Query: 1093 XXXGGXPXGXXKXXGXPGNPXGPXXXP-XXXGXXXXXPXGXGGXXXPXGGXXXGG 1254
G P G G PG P GP P G P G G P G G
Sbjct: 148 QPCPGGPPGPAGPAGPPG-PPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 7.0
Identities = 30/115 (26%), Positives = 31/115 (26%), Gaps = 1/115 (0%)
Frame = +1
Query: 913 GXXXGGXGXXXXXGXXGXXKXGGXXGKXXXXXAXXGXNRKXGGGGGXXXAXPRXXXKXXX 1092
G GG G G GG GK G G G A +
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKP-GKPGAPGAPGNPGKGASAPCEPVTQPPC 147
Query: 1093 XXXGGXPXGXXKXXGXPGNPXGPXXXP-XXXGXXXXXPXGXGGXXXPXGGXXXGG 1254
G P G G PG P GP P G P G G P G G
Sbjct: 148 QPCPGGPPGPAGPAGPPG-PPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 6/88 (6%)
Frame = -1
Query: 1262 GXXPPX-XXPP-XGXXXPPXPXGKXXXXPXXXGXXXGPXGXP----GXPXXFXXPXGXPP 1101
G PP PP G PP P G P G P G P P G PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 1100 XXXXXFXXXXRGXAXXKPPPPPXXRXXP 1017
+G PPPPP P
Sbjct: 771 PPPPPPPGGFKG---GPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 6/88 (6%)
Frame = -1
Query: 1262 GXXPPX-XXPP-XGXXXPPXPXGKXXXXPXXXGXXXGPXGXP----GXPXXFXXPXGXPP 1101
G PP PP G PP P G P G P G P P G PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 1100 XXXXXFXXXXRGXAXXKPPPPPXXRXXP 1017
+G PPPPP P
Sbjct: 771 PPPPPPPGGFKG---GPPPPPPPGMFAP 795
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 7.0
Identities = 30/115 (26%), Positives = 31/115 (26%), Gaps = 1/115 (0%)
Frame = +1
Query: 913 GXXXGGXGXXXXXGXXGXXKXGGXXGKXXXXXAXXGXNRKXGGGGGXXXAXPRXXXKXXX 1092
G GG G G GG GK G G G A +
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKP-GKPGAPGAPGNPGKGASAPCEPVTQPPC 147
Query: 1093 XXXGGXPXGXXKXXGXPGNPXGPXXXP-XXXGXXXXXPXGXGGXXXPXGGXXXGG 1254
G P G G PG P GP P G P G G P G G
Sbjct: 148 QPCPGGPPGPAGPAGPPG-PPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 7.0
Identities = 30/115 (26%), Positives = 31/115 (26%), Gaps = 1/115 (0%)
Frame = +1
Query: 913 GXXXGGXGXXXXXGXXGXXKXGGXXGKXXXXXAXXGXNRKXGGGGGXXXAXPRXXXKXXX 1092
G GG G G GG GK G G G A +
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKP-GKPGAPGAPGNPGKGASAPCEPVTQPPC 147
Query: 1093 XXXGGXPXGXXKXXGXPGNPXGPXXXP-XXXGXXXXXPXGXGGXXXPXGGXXXGG 1254
G P G G PG P GP P G P G G P G G
Sbjct: 148 QPCPGGPPGPAGPAGPPG-PPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPG 201
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 6/88 (6%)
Frame = -1
Query: 1262 GXXPPX-XXPP-XGXXXPPXPXGKXXXXPXXXGXXXGPXGXP----GXPXXFXXPXGXPP 1101
G PP PP G PP P G P G P G P P G PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 1100 XXXXXFXXXXRGXAXXKPPPPPXXRXXP 1017
+G PPPPP P
Sbjct: 354 PPPPPPPGGFKG---GPPPPPPPGMFAP 378
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.1 bits (62), Expect = 7.0
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 2/72 (2%)
Frame = -1
Query: 1250 PXXXPPXGXXXPPXPXGKXXXXPXXXGXXXGPXGXPGXPXXFXXP--XGXPPXXXXXFXX 1077
P P G PP P G GP G PG P P G P
Sbjct: 252 PGTPGPAGPPGPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQP 311
Query: 1076 XXRGXAXXKPPP 1041
G PPP
Sbjct: 312 GAGGGCDHCPPP 323
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical protein
F33A8.9 protein.
Length = 346
Score = 28.7 bits (61), Expect = 9.2
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = -1
Query: 1253 PPXXXPPXGXXXPPXPXGKXXXX-PXXXGXXXGPXGXPGXPXXFXXPXGXPP 1101
PP P G P P G P GP G PG P P G P
Sbjct: 203 PPARSGPPGPPGPKGPRGTPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGP 254
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical protein
T21B4.2 protein.
Length = 312
Score = 28.7 bits (61), Expect = 9.2
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = -1
Query: 1253 PPXXXPPXGXXXPPX-PXGKXXXXPXXXGXXXGPXGXPGXP 1134
PP P G PP P G G GP G PG P
Sbjct: 170 PPGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPP 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,878,101
Number of Sequences: 27780
Number of extensions: 369807
Number of successful extensions: 1249
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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