Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_N13.2
         (1279 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical ...    41   0.002
Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical pr...    31   2.3  
Z78546-1|CAB01769.1|  364|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z50027-1|CAA90331.1|  583|Caenorhabditis elegans Hypothetical pr...    29   9.3  

>AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.2 protein.
          Length = 178

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 16/47 (34%), Positives = 31/47 (65%)
 Frame = +1

Query: 262 LWKKHXVAXXXATTYSIFXNNALFLTXVILSSFYILRTFTPTVNYIV 402
           L++K+ VA   +T  S+F  N+L+LT +++S+F++L    P  N ++
Sbjct: 115 LFRKNEVADTESTYLSVFYTNSLYLTIMLVSAFFLLANVAPVFNLLI 161


>Z54327-9|CAA91122.2|  839|Caenorhabditis elegans Hypothetical
           protein C26D10.4 protein.
          Length = 839

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 428 LLYSPQEPSEAGSLMRHVIQTVLILNILDILWQLK 532
           L+Y   +PSEAGSL+   I ++   NILDI  +L+
Sbjct: 552 LIYRHDKPSEAGSLVCACIVSLGFTNILDIFEKLQ 586


>Z78546-1|CAB01769.1|  364|Caenorhabditis elegans Hypothetical
           protein T21H8.3 protein.
          Length = 364

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 554 YTHNSFIFLIATVCLKCLILKLFVSRGALNFQLHLV 447
           Y H++ +FL+A     CLIL    +  A NF + L+
Sbjct: 46  YYHSNLLFLVALNAASCLILAGLTAWSATNFFVQLI 81


>Z50027-1|CAA90331.1|  583|Caenorhabditis elegans Hypothetical
           protein C39B10.1 protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
 Frame = -3

Query: 617 LTYFLCKVKTF*LTNIIYCNTYTHNSFIFLI------ATVCLKCLILKLFVSRGALNFQL 456
           + Y LC + T+ + ++IY  T  +  F +++      A+ C+ C I ++F    A+  + 
Sbjct: 91  IIYLLCCLSTYCIPSLIYSVTPIYGPFSYILFFLQPFASFCVSCTIWQVF----AITLER 146

Query: 455 HLV---PVESRAR 426
           +L    P+E R R
Sbjct: 147 YLAVSSPLEQRTR 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,272,966
Number of Sequences: 27780
Number of extensions: 256392
Number of successful extensions: 440
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3568584636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)