Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_N08.2
         (1271 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0317 - 16328558-16328612,16328698-16328901,16329794-163300...   279   3e-75
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419          278   6e-75
07_03_0100 + 13389899-13390219,13390723-13390841,13391220-133913...    32   0.84 
01_07_0219 + 42079095-42079399,42079584-42079728,42081695-420817...    31   1.5  
05_06_0125 - 25828093-25828911,25830398-25830530,25830644-25831062     29   7.8  

>11_04_0317 -
           16328558-16328612,16328698-16328901,16329794-16330065,
           16330152-16330220
          Length = 199

 Score =  279 bits (684), Expect = 3e-75
 Identities = 135/159 (84%), Positives = 147/159 (92%)
 Frame = +1

Query: 328 AKSLPHSAGRSAHKRFRKAQCPIVERLTNSLMXHGRNNGKKLMAVRIVKHAFEIIHLLTG 507
           A  LPH+AGR + KRFRKAQCPIVERLTNSLM HGRNNGKK+MAVRIVKHA EIIHLLT 
Sbjct: 41  ATYLPHTAGRYSAKRFRKAQCPIVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTD 100

Query: 508 ENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRN 687
            NP+QV+V AIINSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRN
Sbjct: 101 ANPIQVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRN 160

Query: 688 IKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 804
           IKTIAEC+ADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 161 IKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 199


>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
          Length = 200

 Score =  278 bits (682), Expect = 6e-75
 Identities = 134/159 (84%), Positives = 147/159 (92%)
 Frame = +1

Query: 328 AKSLPHSAGRSAHKRFRKAQCPIVERLTNSLMXHGRNNGKKLMAVRIVKHAFEIIHLLTG 507
           A  LPH+AGR + KRFRKAQCP+VERLTNSLM HGRNNGKK+MAVRIVKHA EIIHLLT 
Sbjct: 42  ATYLPHTAGRYSAKRFRKAQCPLVERLTNSLMMHGRNNGKKIMAVRIVKHAMEIIHLLTD 101

Query: 508 ENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRN 687
            NP+QV+V AIINSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGARE+AFRN
Sbjct: 102 ANPIQVIVDAIINSGPREDATRIGSAGAVRRQAVDISPLRRVNQAIYLLTTGARESAFRN 161

Query: 688 IKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 804
           IKTIAEC+ADELINAAKGSSNSYAIKKKDE+ERVAK+NR
Sbjct: 162 IKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 200


>07_03_0100 +
           13389899-13390219,13390723-13390841,13391220-13391315,
           13391481-13391553,13392055-13392123
          Length = 225

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -1

Query: 683 LNAASRAPVHKSQIAWLTRRKGETSTA*RRTVPARPILVESSRGPE 546
           L+A+SR P  + +I    RR+G + +  RR+ P +P     +R PE
Sbjct: 49  LHASSRVPAARHRIVCPCRRRGGSPSLTRRSSPEKPGPFSQTRSPE 94


>01_07_0219 +
           42079095-42079399,42079584-42079728,42081695-42081739,
           42082150-42082265,42082913-42083012,42083103-42083138,
           42083301-42083351,42083431-42083565
          Length = 310

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +1

Query: 595 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNS 753
           RR+AV  + +RR+  A WL   GAR A  R         A E++ +A G   S
Sbjct: 9   RREAVRAAHVRRIEAAAWL---GARRATRREDAAARCAAAGEVVGSAAGVGRS 58


>05_06_0125 - 25828093-25828911,25830398-25830530,25830644-25831062
          Length = 456

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = -2

Query: 214 GXXQGGHNHAAXRGDGGQDPGTTAAQXLGNG 122
           G   GG       GDGG DPGT  A     G
Sbjct: 27  GAVDGGDGGGGEAGDGGPDPGTPEADPAPRG 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,035,556
Number of Sequences: 37544
Number of extensions: 385474
Number of successful extensions: 889
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3945842028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)