Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_N08.2
         (1271 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5 pr...   311   3e-84
BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5 pr...   311   3e-84
AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5 pr...   311   3e-84
AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5 va...   308   4e-83
U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5 prot...   307   7e-83
AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5 pr...   113   1e-24
AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5 va...    90   2e-17

>BC018151-1|AAH18151.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  311 bits (764), Expect = 3e-84
 Identities = 153/164 (93%), Positives = 155/164 (94%)
 Frame = +1

Query: 313 VKAXXAKSLPHSAGRSAHKRFRKAQCPIVERLTNSLMXHGRNNGKKLMAVRIVKHAFEII 492
           VK   AK LPHSAGR A KRFRKAQCPIVERLTNS+M HGRNNGKKLM VRIVKHAFEII
Sbjct: 41  VKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100

Query: 493 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 672
           HLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 160

Query: 673 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 804
           AAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 161 AAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204


>BC015405-1|AAH15405.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  311 bits (764), Expect = 3e-84
 Identities = 153/164 (93%), Positives = 155/164 (94%)
 Frame = +1

Query: 313 VKAXXAKSLPHSAGRSAHKRFRKAQCPIVERLTNSLMXHGRNNGKKLMAVRIVKHAFEII 492
           VK   AK LPHSAGR A KRFRKAQCPIVERLTNS+M HGRNNGKKLM VRIVKHAFEII
Sbjct: 41  VKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100

Query: 493 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 672
           HLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 160

Query: 673 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 804
           AAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 161 AAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204


>AB061853-1|BAB79493.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  311 bits (764), Expect = 3e-84
 Identities = 153/164 (93%), Positives = 155/164 (94%)
 Frame = +1

Query: 313 VKAXXAKSLPHSAGRSAHKRFRKAQCPIVERLTNSLMXHGRNNGKKLMAVRIVKHAFEII 492
           VK   AK LPHSAGR A KRFRKAQCPIVERLTNS+M HGRNNGKKLM VRIVKHAFEII
Sbjct: 41  VKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100

Query: 493 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 672
           HLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 160

Query: 673 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 804
           AAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 161 AAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204


>AK223106-1|BAD96826.1|  204|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 204

 Score =  308 bits (755), Expect = 4e-83
 Identities = 151/164 (92%), Positives = 154/164 (93%)
 Frame = +1

Query: 313 VKAXXAKSLPHSAGRSAHKRFRKAQCPIVERLTNSLMXHGRNNGKKLMAVRIVKHAFEII 492
           VK   AK LPHSAGR A KRFRKAQCPIVERLTNS+M HGRNNGKKLM VRIVKHAFEII
Sbjct: 41  VKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100

Query: 493 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 672
           HLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 160

Query: 673 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 804
           AAFRNIKTIAEC+ADELINAAKGSSN YAIKK+DELERVAKSNR
Sbjct: 161 AAFRNIKTIAECLADELINAAKGSSNFYAIKKRDELERVAKSNR 204


>U14970-1|AAA85658.1|  204|Homo sapiens ribosomal protein S5
           protein.
          Length = 204

 Score =  307 bits (753), Expect = 7e-83
 Identities = 151/164 (92%), Positives = 153/164 (93%)
 Frame = +1

Query: 313 VKAXXAKSLPHSAGRSAHKRFRKAQCPIVERLTNSLMXHGRNNGKKLMAVRIVKHAFEII 492
           VK   AK LPHSAGR A   FRKAQCPIVERLTNS+M HGRNNGKKLM VRIVKHAFEII
Sbjct: 41  VKEKYAKYLPHSAGRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100

Query: 493 HLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 672
           HLLTGENPLQVLV AIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARE 160

Query: 673 AAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 804
           AAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 161 AAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204


>AB007149-1|BAA25815.1|   55|Homo sapiens ribosomal protein S5
           protein.
          Length = 55

 Score =  113 bits (272), Expect = 1e-24
 Identities = 54/55 (98%), Positives = 55/55 (100%)
 Frame = +1

Query: 640 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 804
           AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1   AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55


>AB209803-1|BAD93040.1|  107|Homo sapiens ribosomal protein S5
           variant protein.
          Length = 107

 Score = 89.8 bits (213), Expect = 2e-17
 Identities = 44/52 (84%), Positives = 45/52 (86%)
 Frame = +1

Query: 382 AQCPIVERLTNSLMXHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 537
           AQCPIVERLTNS+M HGRNNGKKLM VRIVKHAFEIIHLLTGE  L  LV A
Sbjct: 1   AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,578,748
Number of Sequences: 237096
Number of extensions: 1995988
Number of successful extensions: 3600
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3594
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18220302130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)