Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_N07.2
         (1321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854...    30   4.7  
07_01_0029 + 235052-235252,235328-236104                               29   6.2  
01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735     29   8.2  

>02_05_0070 -
           25584690-25584806,25585151-25585312,25585396-25585491,
           25585894-25585955,25586035-25586110,25586195-25586277,
           25586456-25586778,25586882-25586928,25587014-25587150,
           25587250-25587322,25588159-25588251,25588543-25588632,
           25588684-25588786,25588869-25588981,25589181-25589778,
           25589888-25590065,25590277-25590296,25590713-25590882,
           25591245-25591485,25592997-25593199
          Length = 994

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 823 SANGRLVFFFFPTYADSLEKLFR 755
           S+ GRL FF F  Y  SL+K+FR
Sbjct: 186 SSGGRLHFFVFDKYIKSLDKVFR 208


>07_01_0029 + 235052-235252,235328-236104
          Length = 325

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 820 ANGRLVFFFFPTYADSLEKLFRLDV*VGSRGSNRE*C 710
           A G     FF  +ADS+ K+  +DV  G++G  R  C
Sbjct: 284 ATGHFADDFFRDFADSMVKMSTIDVLTGAQGEIRNKC 320


>01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735
          Length = 637

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +1

Query: 676 LRSTALARASVSITPGLSPVSPPTRQGEIASQGYQHR*EKKKKPSDHLPITE 831
           L +T  A +SV  T G S   P + + + AS     + E+++KP DH P  E
Sbjct: 114 LSATTSANSSVPWTTGSSNAQPLS-ETKTASSSSDAKPEQQEKPRDHQPSQE 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,350,440
Number of Sequences: 37544
Number of extensions: 357749
Number of successful extensions: 650
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4132076460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)