Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_N06.2
         (1282 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.6  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    25   4.7  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   6.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   8.3  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 821  EAMVEHLNDEQRKFYGNKIESLNNY 895
            E + E  +  Q KFY N  +SLNN+
Sbjct: 3265 EELEESRHILQHKFYSNNSQSLNNF 3289


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 4.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 578 IRKTAIETTSKPKPRIINVGSHCGLQPLPAF 670
           IRK+      KP+  +I VG   GL P   F
Sbjct: 515 IRKSQFRLPPKPETPVIMVGPGTGLAPFRGF 545


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylcholine
            receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 1007 ESWKYMFIIINEMXLXLXFI 1066
            E WKY+ ++I+ + L + FI
Sbjct: 468  EDWKYVAMVIDRLQLYIFFI 487


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
 Frame = -1

Query: 289  AIVMKPDAGEASCDCPTEATSTPGDXRTXTAXPDRR--AXRX*RRRXR---LXDXKXGRQ 125
            A V   +AGEA    P      P   RT  A  +RR    R  R+R R   L     GR 
Sbjct: 1105 AAVRAEEAGEAPPPIPMRRRGLPPSPRTVRARHERRLYLQRLYRQRAREGTLPTVPHGRN 1164

Query: 124  XRS 116
             RS
Sbjct: 1165 RRS 1167


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 969,562
Number of Sequences: 2352
Number of extensions: 17310
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147148920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)