Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_M24.2
         (1240 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0218 + 18219956-18220555                                         33   0.46 
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   2.5  
08_01_0156 - 1233431-1233925                                           29   10.0 
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365...    29   10.0 
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   10.0 

>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 33.1 bits (72), Expect = 0.46
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = -2

Query: 795 NGGFVHTAQLGANDLHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 616
           NGG     ++ A    +T  P     R R   R E  G  + KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 615 LVS 607
             S
Sbjct: 137 RAS 139


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +2

Query: 515 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 673
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>08_01_0156 - 1233431-1233925
          Length = 164

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -2

Query: 768 LGANDLHRTEIPTA*AMRKRHASRREK--GGQVSGKRQGRNRRAHEGASRGKRLVSL*SC 595
           LG  D   TE+  A A     A+R E+  GG   G R G   RA +   +G     +   
Sbjct: 89  LGDADATATEVDAAAAAEAEAAARGERGDGGGDGGGRAGGRGRARDEREKGAAADRVLGV 148

Query: 594 RVSPPLT 574
           R SP ++
Sbjct: 149 RASPTVS 155


>05_01_0462 -
           3658153-3658290,3658394-3658540,3658622-3658720,
           3658802-3659253,3659597-3660280,3662072-3662180
          Length = 542

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
 Frame = +1

Query: 625 PGSSLVRSPVPTLPLTGYLSAFLPSGSVALS-HSSRCR-YLSSV*VVRSKLGCVHEPPVQ 798
           P S+ + +PVPTLP++   + F   G    S H +  R Y        S  G V   P  
Sbjct: 282 PQSTNISAPVPTLPISCDSAPFAHGGYAPRSAHRNNLRTYPPPAFASSSNPGAVSHEPAI 341

Query: 799 PXRCALSGNYRLESNPVRHDLSPLAAATGNRISXARYV 912
           P     + +Y   ++     + P  A     +   R+V
Sbjct: 342 PSYPPAAPSYPPATSAASSSVQPFHAEAAAHLRHPRHV 379


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 10.0
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 347 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 502
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,035,949
Number of Sequences: 37544
Number of extensions: 504876
Number of successful extensions: 1464
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3817805856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)