Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_M23.2
(1284 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 99 3e-19
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 97 7e-19
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 91 8e-17
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 86 2e-15
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 67 1e-09
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 60 2e-07
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 53 2e-05
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 50 1e-04
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 49 3e-04
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 47 0.001
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 46 0.002
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 46 0.002
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.42
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.74
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 37 0.98
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 34 9.1
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 98.7 bits (235), Expect = 3e-19
Identities = 54/104 (51%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +3
Query: 87 PKTAQAVLQKXSMPQSPQGLTVQKVQGKGTL-PRXRSRYXRKQQGYGGQSKPIFXXXXXX 263
PKT + +K Q P +T K +GK +L + R RY RKQ GYGGQ+KPIF
Sbjct: 5 PKTRRTFCKKCGKHQ-PHKVTQYK-KGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 264 XXXIVLRLECAD--CKVXSQVALKXCKHFELGGDKKRKGQMIQF 389
IVLRLEC + C+ +A+K CKHFELGGDKKRKGQ+IQF
Sbjct: 63 TKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 97.5 bits (232), Expect = 7e-19
Identities = 53/104 (50%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Frame = +3
Query: 87 PKTAQAVLQKXSMPQSPQGLTVQKVQGKGTL-PRXRSRYXRKQQGYGGQSKPIFXXXXXX 263
PKT + +K Q P +T K +GK +L + + RY RKQ GYGGQ+KPIF
Sbjct: 5 PKTRRTFCKKCGKHQ-PHKVTQYK-KGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKT 62
Query: 264 XXXIVLRLECAD--CKVXSQVALKXCKHFELGGDKKRKGQMIQF 389
IVLRLEC + C+ +A+K CKHFELGGDKKRKGQ+IQF
Sbjct: 63 TKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 90.6 bits (215), Expect = 8e-17
Identities = 43/101 (42%), Positives = 56/101 (55%)
Frame = +3
Query: 87 PKTAQAVLQKXSMPQSPQGLTVQKVQGKGTLPRXRSRYXRKQQGYGGQSKPIFXXXXXXX 266
PK + + +T K + + R RY RKQ G+GGQ+KPIF
Sbjct: 5 PKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTT 64
Query: 267 XXIVLRLECADCKVXSQVALKXCKHFELGGDKKRKGQMIQF 389
IVLR+EC +CK Q+ +K CKHFELGG KK +GQ+IQF
Sbjct: 65 KKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 85.8 bits (203), Expect = 2e-15
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +3
Query: 87 PKTAQAVLQKXSMPQSPQGLTVQKVQGKGTLP-RXRSRYXRKQQGYGGQSKPIFXXXXXX 263
PKT + + + Q +GK +L + + RY RKQ GYGGQ+KP+F
Sbjct: 51 PKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKT 110
Query: 264 XXXIVLRLECADCKVXSQVALKXCKHFELGGDKKRKG 374
IVLRL+C CK SQ +K CKHFE+GGDKK KG
Sbjct: 111 TKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.9 bits (156), Expect = 1e-09
Identities = 32/43 (74%), Positives = 32/43 (74%)
Frame = -1
Query: 912 PFXGLLLTCXFLRYPLILWITVLPPLSELIPLXAAERPSXASQ 784
P LLTC F YPLILWITVLPPLSEL PL A ERPS ASQ
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVASQ 61
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 59.7 bits (138), Expect = 2e-07
Identities = 43/104 (41%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +1
Query: 748 VCVLGALPXPRSLTRXARSFGCGERYQLTQRX*YGYPQNQGITQEXTCEQKAXKRXXTVK 927
+C G +P PRSLTR ARSFGCGERY+LT G E T + + +
Sbjct: 30 ICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDTRKTLSKEEI---- 77
Query: 928 RPXXWXFXIGSAPLTSI-KKXXXXXRWXXRXXXKXXXXFPLXXP 1056
RP F IGSAPLTSI K R K FPL P
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP 121
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 52.8 bits (121), Expect = 2e-05
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 273 IVLRLECADCKVXSQVALKXCKHFELGGDKKRKG 374
IVL+L+C CK SQ +K CKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 50.0 bits (114), Expect = 1e-04
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 165 GKGTL-PRXRSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVXSQVALKXCKH 341
GK +L + + RY RKQQGYGGQ+KP+F ++L C CK +LK K
Sbjct: 29 GKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTKR 88
Query: 342 FEL 350
F++
Sbjct: 89 FQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 48.8 bits (111), Expect = 3e-04
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +3
Query: 189 RSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVXSQVALKXCKHFELGGDKKR 368
R RY RKQ+G+GG+ KPI I LR C CK + L + FE +KK+
Sbjct: 38 RRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKK 97
Query: 369 K 371
K
Sbjct: 98 K 98
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 47.2 bits (107), Expect = 0.001
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 712 CINESANARGXAVCVLGALPXPRSLTRXARSFGCGERYQL-TQRX*YGYPQNQGITQ 879
CI + A AR AV VL ALP RS TR RS GCG + YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 46.4 bits (105), Expect = 0.002
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +3
Query: 819 AVSAHSKXVIRLSTESGDNAGXNM 890
AVSAHSK VIRLSTESGDNAG NM
Sbjct: 36 AVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 46.0 bits (104), Expect = 0.002
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 153 QKVQGKGTLP-RXRSRYXRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVXSQVALK 329
Q +GK +L + + RY RKQQG+GGQ+KP+F + ++EC CK+ +
Sbjct: 9 QYKKGKDSLHVQGKRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRES 67
Query: 330 XC 335
C
Sbjct: 68 TC 69
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 38.3 bits (85), Expect = 0.42
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 710 SALMNRPTRGXRRFAYW 760
+ALMNRPTRG RRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.5 bits (83), Expect = 0.74
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2
Query: 764 APNTQTAXPRALADSLMQ 711
APNTQTA PRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 37.1 bits (82), Expect = 0.98
Identities = 25/49 (51%), Positives = 28/49 (57%)
Frame = +1
Query: 217 VTVVSPNPSSKXRQKPLXKLCSVLSVQIAR*XHRLH*XDASTLSSVVTR 363
VTVV P+ SS R +P +L SV S AR DAST SSVVTR
Sbjct: 54 VTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVTR 102
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 33.9 bits (74), Expect = 9.1
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 321 ALKXCKHFELGGDKKRKG 374
+++ CKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,227,239
Number of Sequences: 1657284
Number of extensions: 10360723
Number of successful extensions: 15756
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15752
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 131199509916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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